RNA–Protein interactions for RNA: ENST00000563939.2

CBFB-204, Transcript of core-binding factor subunit beta, humanhuman

TSL 4

Gene CBFB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-204ENST00000563939 LPOP22079 712 aaPredicted RBP18.97■□□□□ 0.63
CBFB-204ENST00000563939 GPR3P46089 330 aa18.97■□□□□ 0.63
CBFB-204ENST00000563939 TMEM115Q12893 351 aaPredicted RBP18.97■□□□□ 0.63
CBFB-204ENST00000563939 GTF2H3Q13889 308 aa18.97■□□□□ 0.63
CBFB-204ENST00000563939 TAF1AQ15573 450 aaPredicted RBP18.97■□□□□ 0.63
CBFB-204ENST00000563939 TBC1D25Q3MII6 688 aa18.97■□□□□ 0.63
CBFB-204ENST00000563939 MAP9Q49MG5 647 aa18.97■□□□□ 0.63
CBFB-204ENST00000563939 MEI1Q5TIA1 1274 aa18.97■□□□□ 0.63
CBFB-204ENST00000563939 LRRC69Q6ZNQ3 347 aa18.97■□□□□ 0.63
CBFB-204ENST00000563939 SLC35B2Q8TB61 432 aa18.97■□□□□ 0.63
CBFB-204ENST00000563939 ATG4AQ8WYN0 398 aa18.97■□□□□ 0.63
CBFB-204ENST00000563939 ZNF578Q96N58 590 aaPredicted RBP18.97■□□□□ 0.63
CBFB-204ENST00000563939 VPS35Q96QK1 796 aa18.97■□□□□ 0.63
CBFB-204ENST00000563939 RDH14Q9HBH5 336 aa18.97■□□□□ 0.63
CBFB-204ENST00000563939 TMPRSS11EQ9UL52 423 aa18.97■□□□□ 0.63
CBFB-204ENST00000563939 A0A1W2PNU3 283 aaPredicted RBP18.96■□□□□ 0.63
CBFB-204ENST00000563939 TNFSF15O95150 251 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 METTL18O95568 372 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 CRTAMO95727 393 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 EIF2S3P41091 472 aaKnown RBP18.96■□□□□ 0.63
CBFB-204ENST00000563939 PDX1P52945 283 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 INSCQ1MX18 579 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 PLA2G4EQ3MJ16 856 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 KHDC1Q4VXA5 237 aaKnown RBP18.96■□□□□ 0.63
CBFB-204ENST00000563939 PHF19Q5T6S3 580 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 IYDQ6PHW0 289 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 RAB11FIP2Q7L804 512 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 ZNF438Q7Z4V0 828 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 LRRTM4Q86VH4 590 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 SLC13A5Q86YT5 568 aaPredicted RBP18.96■□□□□ 0.63
CBFB-204ENST00000563939 FBXO39Q8N4B4 442 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 OR4K2Q8NGD2 314 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 ZNF398Q8TD17 642 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 BRSK1Q8TDC3 778 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 SLC37A2Q8TED4 501 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 SLC46A1Q96NT5 459 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 SLC38A3Q99624 504 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 PRDM8Q9NQV8 689 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 KCNK4Q9NYG8 393 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 SLC23A2Q9UGH3 650 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 ZNF148Q9UQR1 794 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 DNAJC16Q9Y2G8 782 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 KCTD3Q9Y597 815 aa18.96■□□□□ 0.63
CBFB-204ENST00000563939 ANKRD11Q6UB99 2663 aaPredicted RBP18.95■□□□□ 0.62
CBFB-204ENST00000563939 A0A087WV48 116 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 PMS2P1A4D2B8 440 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 CHUKO15111 745 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 CPNE6O95741 557 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 SLC2A4P14672 509 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 ZNF7P17097 686 aaPredicted RBP18.95■□□□□ 0.62
CBFB-204ENST00000563939 CD1CP29017 333 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 STIP1P31948 543 aaKnown RBP18.95■□□□□ 0.62
CBFB-204ENST00000563939 GDF10P55107 478 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 CCZ1BP86790 482 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 CCZ1P86791 482 aaPredicted RBP18.95■□□□□ 0.62
CBFB-204ENST00000563939 CCDC173Q0VFZ6 552 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 NFATC2Q13469 925 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 SNX1Q13596 522 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 ITGA9Q13797 1035 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 LDLRAP1Q5SW96 308 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 NKAIN2Q5VXU1 208 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 ZNF662Q6ZS27 426 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 ZNF761Q86XN6 746 aaPredicted RBP18.95■□□□□ 0.62
CBFB-204ENST00000563939 TRAPPC5Q8IUR0 188 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 SFRP1Q8N474 314 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 DTX3LQ8TDB6 740 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 C1orf54Q8WWF1 131 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 AHCYL2Q96HN2 611 aaKnown RBP18.95■□□□□ 0.62
CBFB-204ENST00000563939 NAF1Q96HR8 494 aaKnown RBP18.95■□□□□ 0.62
CBFB-204ENST00000563939 GRPEL1Q9HAV7 217 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 THSD1Q9NS62 852 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 LHX6Q9UPM6 363 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 PCDHGA8Q9Y5G5 932 aa18.95■□□□□ 0.62
CBFB-204ENST00000563939 URB1O60287 2271 aaKnown RBP18.94■□□□□ 0.62
CBFB-204ENST00000563939 APC2O95996 2303 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 PLD2O14939 933 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 PSMD3O43242 534 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 LIASO43766 372 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 DXOO77932 396 aaKnown RBP18.94■□□□□ 0.62
CBFB-204ENST00000563939 F3P13726 295 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 TPH1P17752 444 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 CCKBRP32239 447 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 ERVPABLB-1P60509 514 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 TMPRSS15P98073 1019 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 PDE1BQ01064 536 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 HHEXQ03014 270 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 ZFP36L1Q07352 338 aaKnown RBP18.94■□□□□ 0.62
CBFB-204ENST00000563939 COL28A1Q2UY09 1125 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 P3H1Q32P28 736 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 DENND5AQ6IQ26 1287 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 SLC9B2Q86UD5 537 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 SNIP1Q8TAD8 396 aaKnown RBP18.94■□□□□ 0.62
CBFB-204ENST00000563939 LIN37Q96GY3 246 aaPredicted RBP18.94■□□□□ 0.62
CBFB-204ENST00000563939 FRMD8P1Q9BZ68 369 aaPredicted RBP18.94■□□□□ 0.62
CBFB-204ENST00000563939 ZCCHC2Q9C0B9 1178 aaKnown RBP18.94■□□□□ 0.62
CBFB-204ENST00000563939 ZMYND15Q9H091 742 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 SEMA6CQ9H3T2 930 aa18.94■□□□□ 0.62
CBFB-204ENST00000563939 STN1Q9H668 368 aaKnown RBP18.94■□□□□ 0.62
CBFB-204ENST00000563939 FEZ2Q9UHY8 353 aaPredicted RBP18.94■□□□□ 0.62
CBFB-204ENST00000563939 RALYQ9UKM9 306 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms