RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 PCDHGA1Q9Y5H4 931 aa8.72□□□□□ -1.01
NSMCE1-206ENST00000563900 IGF2RP11717 2491 aa8.72□□□□□ -1.01
NSMCE1-206ENST00000563900 COL27A1Q8IZC6 1860 aaPredicted RBP8.71□□□□□ -1.01
NSMCE1-206ENST00000563900 AKAP13Q12802 2813 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 MED19A0JLT2 244 aaPredicted RBP8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 EME2A4GXA9 379 aaPredicted RBP8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 A6NCN8 305 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 AP3B1O00203 1094 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 CCL22O00626 93 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 TP73O15350 636 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 SGTAO43765 313 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 NOBOXO60393 691 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 MLNP12872 115 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 CTSEP14091 401 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 AK4P27144 223 aaPredicted RBP8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 CASQ1P31415 396 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 FOXN2P32314 431 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 PAFAH1B1P43034 410 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 LMAN1P49257 510 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 VPS41P49754 854 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 CLCNKAP51800 687 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 B4GALNT1Q00973 533 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 ILF3Q12906 894 aaKnown RBP eCLIP8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 DNAJC3Q13217 504 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 ILKQ13418 452 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 LAMB3Q13751 1172 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 CCDC38Q502W7 563 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 LDLRAP1Q5SW96 308 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 TSTD2Q5T7W7 516 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 RNASEH2BQ5TBB1 312 aaKnown RBP8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 PPP1R21Q6ZMI0 780 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 SYDE1Q6ZW31 735 aaPredicted RBP8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 MARK2Q7KZI7 788 aaKnown RBP8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 NLRP9Q7RTR0 991 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 SNX20Q7Z614 316 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 RAB44Q7Z6P3 723 aaPredicted RBP8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 JAMLQ86YT9 394 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 GALNT13Q8IUC8 556 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 SFTPA2Q8IWL1 248 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 PIANPQ8IYJ0 282 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 AGGF1Q8N302 714 aaeCLIP8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 NXPE1Q8N323 547 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 ARL10Q8N8L6 244 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 ZNF398Q8TD17 642 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 CCDC97Q96F63 343 aaPredicted RBP8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 SGSM3Q96HU1 749 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 C16orf45Q96MC5 204 aaPredicted RBP8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 RUNDC3BQ96NL0 473 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 SERPINB12Q96P63 405 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 TIMM29Q9BSF4 260 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 KIFC1Q9BW19 673 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 GSDMCQ9BYG8 508 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 IL22Q9GZX6 179 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 MRM3Q9HC36 420 aaKnown RBP8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 ARFGAP3Q9NP61 516 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 NCKIPSDQ9NZQ3 722 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 TAAR2Q9P1P5 351 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 SLC2A6Q9UGQ3 507 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 PLEKHM1Q9Y4G2 1056 aa8.71□□□□□ -1.02
NSMCE1-206ENST00000563900 DNALI1O14645 258 aaPredicted RBP8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 GRID2O43424 1007 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 RFPL3O75679 317 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 CDK14O94921 469 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 ASMTLO95671 621 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 GP1BAP07359 652 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 MYF5P13349 255 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 ITGALP20701 1170 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 MGAT1P26572 445 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 ARNTP27540 789 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 MC4RP32245 332 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 NPY2RP49146 381 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 CTSCP53634 463 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 TMPRSS15P98073 1019 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 SHC2P98077 582 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 TMEM115Q12893 351 aaPredicted RBP8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 SEPT6Q14141 434 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 HLTFQ14527 1009 aaKnown RBP eCLIP8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 TCEA2Q15560 299 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 SKIDA1Q1XH10 827 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 GPR33Q49SQ1 333 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 PCID2Q5JVF3 399 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 GUSBP11Q6P575 273 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 XKR5Q6UX68 686 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 TAF8Q7Z7C8 310 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 HOOK3Q86VS8 718 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 PPIL6Q8IXY8 311 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 RASGEF1AQ8N9B8 481 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 KYQ8NBH2 561 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 SPATA4Q8NEY3 305 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 ZCCHC2Q9C0B9 1178 aaKnown RBP8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 ASB8Q9H765 288 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 SUDS3Q9H7L9 328 aaPredicted RBP8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 CHRAC1Q9NRG0 131 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 SPATS2LQ9NUQ6 558 aaKnown RBP8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 SYBUQ9NX95 663 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 BFARQ9NZS9 450 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 GULP1Q9UBP9 304 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 SLC23A2Q9UGH3 650 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 MOSPD1Q9UJG1 213 aa8.7□□□□□ -1.02
NSMCE1-206ENST00000563900 SOX13Q9UN79 622 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms