RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 AMTP48728 403 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 CENPAP49450 140 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 BLKP51451 505 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 DCAF7P61962 342 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 YWHAZP63104 245 aaKnown RBP5.02□□□□□ -1.61
LINC00254-201ENST00000563416 HNF4GQ14541 408 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 SHROOM1Q2M3G4 852 aaPredicted RBP5.02□□□□□ -1.61
LINC00254-201ENST00000563416 WDR45BQ5MNZ6 344 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 GPATCH4Q5T3I0 446 aaKnown RBP5.02□□□□□ -1.61
LINC00254-201ENST00000563416 ATG16L1Q676U5 607 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 CTR9Q6PD62 1173 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 CENPQQ7L2Z9 268 aaPredicted RBP5.02□□□□□ -1.61
LINC00254-201ENST00000563416 ANKRD23Q86SG2 305 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 CPXM2Q8N436 756 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 MCPH1Q8NEM0 835 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 RFWD2Q8NHY2 731 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 RFFLQ8WZ73 363 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 CHCHD6Q9BRQ6 235 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 TM6SF1Q9BZW5 370 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 NPFFR1Q9GZQ6 430 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 EPHX3Q9H6B9 360 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 MVB12BQ9H7P6 319 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 SPATS2LQ9NUQ6 558 aaKnown RBP5.02□□□□□ -1.61
LINC00254-201ENST00000563416 MCM9Q9NXL9 1143 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.02□□□□□ -1.61
LINC00254-201ENST00000563416 KIAA0100Q14667 2235 aaKnown RBP5.02□□□□□ -1.61
LINC00254-201ENST00000563416 LRRC37A2A6NM11 1700 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 TRIP12Q14669 1992 aaPredicted RBP5.02□□□□□ -1.61
LINC00254-201ENST00000563416 KIAA1217Q5T5P2 1943 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 ALPK3Q96L96 1907 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 A0A0D9SFI3 127 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 ARHGAP10A1A4S6 786 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 FSD2A1L4K1 749 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 FAM90A7PA6NKC0 464 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 FAM90A22PA8MWA6 464 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 FAM90A12PA8MX19 464 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 FAM90A23PA8MXZ1 464 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 PER2O15055 1255 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 SLC25A17O43808 307 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 CEP104O60308 925 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 GFPT2O94808 682 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 GH2P01242 217 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 ATP1A3P13637 1013 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 CD72P21854 359 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 MYF6P23409 242 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 RRM1P23921 792 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 DCTDP32321 178 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 PGM1P36871 562 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 SLC18A2Q05940 514 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 ST3GAL1Q11201 340 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 ALX1Q15699 326 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 ASIC2Q16515 512 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 FBXO43Q4G163 708 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 ZNF585BQ52M93 769 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 EFHC1Q5JVL4 640 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 CRELD2Q6UXH1 353 aaPredicted RBP5.01□□□□□ -1.61
LINC00254-201ENST00000563416 ADGRG6Q86SQ4 1221 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 DENND6AQ8IWF6 608 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 GDPD5Q8WTR4 605 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 UCMAQ8WVF2 138 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 C12orf42Q96LP6 360 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 TIGD1Q96MW7 591 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.01□□□□□ -1.61
LINC00254-201ENST00000563416 KRTAP9-8Q9BYQ0 159 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 LMAN2LQ9H0V9 348 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 CDT1Q9H211 546 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 PREBQ9HCU5 417 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 TMEM160Q9NX00 188 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 AASSQ9UDR5 926 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 NOL7Q9UMY1 257 aaKnown RBP5.01□□□□□ -1.61
LINC00254-201ENST00000563416 AGTPBP1Q9UPW5 1226 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 ZHX2Q9Y6X8 837 aa5.01□□□□□ -1.61
LINC00254-201ENST00000563416 BAZ2BQ9UIF8 2168 aaKnown RBP5.01□□□□□ -1.61
LINC00254-201ENST00000563416 CCDC171Q6TFL3 1326 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 RAD50Q92878 1312 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 C19orf81C9J6K1 198 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 HIP1O00291 1037 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 PDHXO00330 501 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 ZNF8P17098 575 aaPredicted RBP5□□□□□ -1.61
LINC00254-201ENST00000563416 PSMC2P35998 433 aaKnown RBP5□□□□□ -1.61
LINC00254-201ENST00000563416 RAD52P43351 418 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 TDO2P48775 406 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 NR1H2P55055 460 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 BACE1P56817 501 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 KHDRBS1Q07666 443 aaKnown RBP eCLIP5□□□□□ -1.61
LINC00254-201ENST00000563416 FAM27E3Q08E93 113 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 SPP2Q13103 211 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 PLCB4Q15147 1175 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 SHBQ15464 509 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 MCMDC2Q4G0Z9 681 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 NAA35Q5VZE5 725 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 C17orf99Q6UX52 265 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 CCDC129Q6ZRS4 1044 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 TMEM179Q6ZVK1 233 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 LRRC8DQ7L1W4 858 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 ZNF589Q86UQ0 364 aaPredicted RBP5□□□□□ -1.61
LINC00254-201ENST00000563416 FJX1Q86VR8 437 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 TNIP2Q8NFZ5 429 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 FAM216AQ8WUB2 273 aa5□□□□□ -1.61
LINC00254-201ENST00000563416 ADAMTS14Q8WXS8 1223 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms