RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 UBE2IP63279 158 aaKnown RBP15.54■□□□□ 0.08
CLK3-211ENST00000563297 CDK18Q07002 472 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 PDK1Q15118 436 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 ALS2CLQ60I27 953 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 B4GALNT4Q76KP1 1039 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 TIPARPQ7Z3E1 657 aaKnown RBP15.54■□□□□ 0.08
CLK3-211ENST00000563297 PHYKPLQ8IUZ5 450 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 TRAM1L1Q8N609 369 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.54■□□□□ 0.08
CLK3-211ENST00000563297 GLYATL1Q969I3 302 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 OLFM3Q96PB7 478 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 ZSCAN5AQ9BUG6 496 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 BRD8Q9H0E9 1235 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 APMAPQ9HDC9 416 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 GPR89AB7ZAQ6 455 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 AKR1B10O60218 316 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 MTA2O94776 668 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 MT-CYBP00156 380 aaPredicted RBP15.53■□□□□ 0.08
CLK3-211ENST00000563297 TPM3P06753 285 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 GPR89BP0CG08 455 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 ZFXP17010 805 aaPredicted RBP15.53■□□□□ 0.08
CLK3-211ENST00000563297 SLC19A1P41440 591 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 PCSK7Q16549 785 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 TEX44Q53QW1 395 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 ZNF569Q5MCW4 686 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 LRRC38Q5VT99 294 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 CEACAM20Q6UY09 585 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 NLGN4XQ8N0W4 816 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 NLGN4YQ8NFZ3 816 aaPredicted RBP15.53■□□□□ 0.08
CLK3-211ENST00000563297 SPATA22Q8NHS9 363 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 RNF25Q96BH1 459 aaPredicted RBP15.53■□□□□ 0.08
CLK3-211ENST00000563297 SLC45A3Q96JT2 553 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 ZPBPQ9BS86 351 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 GPR63Q9BZJ6 419 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 TRIM4Q9C037 500 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 SLC25A18Q9H1K4 315 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 EPB41L1Q9H4G0 881 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 UCK1Q9HA47 277 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 GLOD4Q9HC38 313 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 RAD18Q9NS91 495 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 ZNHIT6Q9NWK9 470 aaKnown RBP15.53■□□□□ 0.08
CLK3-211ENST00000563297 OGFRQ9NZT2 677 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 ZNF624Q9P2J8 865 aaPredicted RBP15.53■□□□□ 0.08
CLK3-211ENST00000563297 NFKBIL1Q9UBC1 381 aaPredicted RBP15.53■□□□□ 0.08
CLK3-211ENST00000563297 KLHL3Q9UH77 587 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 IL17BQ9UHF5 180 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 ZNF711Q9Y462 761 aa15.53■□□□□ 0.08
CLK3-211ENST00000563297 LOC101059948A0A1B0GTJ6 334 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 LILRA5A6NI73 299 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 PRR19A6NJB7 356 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 TERTO14746 1132 aaKnown RBP15.52■□□□□ 0.08
CLK3-211ENST00000563297 AURKAO14965 403 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 PPP1R12AO14974 1030 aaPredicted RBP15.52■□□□□ 0.08
CLK3-211ENST00000563297 KMOO15229 486 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 CAPN5O15484 640 aaPredicted RBP15.52■□□□□ 0.08
CLK3-211ENST00000563297 NKX2-8O15522 239 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 PPFIA2O75334 1257 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 NDST3O95803 873 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 ZNF7P17097 686 aaPredicted RBP15.52■□□□□ 0.08
CLK3-211ENST00000563297 BPIP17213 487 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 MAP4P27816 1152 aaKnown RBP15.52■□□□□ 0.08
CLK3-211ENST00000563297 CSRP3P50461 194 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 SLC14A2Q15849 920 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 PDPK2PQ6A1A2 396 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 BORAQ6PGQ7 559 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 ATG14Q6ZNE5 492 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 RFX6Q8HWS3 928 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 PLXDC1Q8IUK5 500 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 RHOT2Q8IXI1 618 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 AVL9Q8NBF6 648 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 ADNPQ9H2P0 1102 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 OSGEPL1Q9H4B0 414 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 SPTLC3Q9NUV7 552 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 TMPRSS11EQ9UL52 423 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 TMEM184BQ9Y519 407 aaPredicted RBP15.52■□□□□ 0.08
CLK3-211ENST00000563297 SLC30A1Q9Y6M5 507 aa15.52■□□□□ 0.08
CLK3-211ENST00000563297 ZNF891A8MT65 544 aaPredicted RBP15.51■□□□□ 0.07
CLK3-211ENST00000563297 POLR1CO15160 346 aaPredicted RBP15.51■□□□□ 0.07
CLK3-211ENST00000563297 VEGFDO43915 354 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 MTX2O75431 263 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 STK17BO94768 372 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 SLC4A1P02730 911 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 C9P02748 559 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 KRT1P04264 644 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 NOP2P46087 812 aaKnown RBP15.51■□□□□ 0.07
CLK3-211ENST00000563297 DYNLT1P63172 113 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 TRIM14Q14142 442 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 KHDC1Q4VXA5 237 aaKnown RBP15.51■□□□□ 0.07
CLK3-211ENST00000563297 CCDC70Q6NSX1 233 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 CRTC3Q6UUV7 619 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 ABRAXAS1Q6UWZ7 409 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 MFSD7Q6UXD7 560 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 TMEM26Q6ZUK4 368 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 LRRTM4Q86VH4 590 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 ZNF547Q8IVP9 402 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 UNC5BQ8IZJ1 945 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 C9orf72Q96LT7 481 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 TEKT5Q96M29 485 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 CCDC42Q96M95 316 aa15.51■□□□□ 0.07
CLK3-211ENST00000563297 NHEJ1Q9H9Q4 299 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms