RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 RALYQ9UKM9 306 aaKnown RBP8.45□□□□□ -1.06
UBR1-204ENST00000563239 KLK13Q9UKR3 277 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 GPR34Q9UPC5 381 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 APOBEC2Q9Y235 224 aaKnown RBP8.45□□□□□ -1.06
UBR1-204ENST00000563239 PKP3Q9Y446 797 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 GPSM3Q9Y4H4 160 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 SAR1BQ9Y6B6 198 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 FAM208BQ5VWN6 2430 aa8.45□□□□□ -1.06
UBR1-204ENST00000563239 PLXNB3Q9ULL4 1909 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 CCDC78A2IDD5 438 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 CTAGE9A4FU28 777 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 A6NCN8 305 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 E7EVH7 732 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 H7C0S8 307 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 GRID2O43424 1007 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 SGTAO43765 313 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 VEGFDO43915 354 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 RFPL3O75679 317 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 SRP72O76094 671 aaKnown RBP8.44□□□□□ -1.06
UBR1-204ENST00000563239 TMEM63AO94886 807 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 TRIM16O95361 564 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 PRAMEF1O95521 474 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 PRSS56P0CW18 603 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 TPSB2P20231 275 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 ACTN2P35609 894 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 VPS41P49754 854 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 CTSCP53634 463 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 ETF1P62495 437 aaKnown RBP8.44□□□□□ -1.06
UBR1-204ENST00000563239 BASP1P80723 227 aaKnown RBP8.44□□□□□ -1.06
UBR1-204ENST00000563239 B4GALNT1Q00973 533 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 PDE1BQ01064 536 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 INSM1Q01101 510 aaPredicted RBP8.44□□□□□ -1.06
UBR1-204ENST00000563239 ACVR1Q04771 509 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 TMEM115Q12893 351 aaPredicted RBP8.44□□□□□ -1.06
UBR1-204ENST00000563239 ILF3Q12906 894 aaKnown RBP eCLIP8.44□□□□□ -1.06
UBR1-204ENST00000563239 GPS1Q13098 491 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 ILKQ13418 452 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 NFATC2Q13469 925 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 HLTFQ14527 1009 aaKnown RBP eCLIP8.44□□□□□ -1.06
UBR1-204ENST00000563239 NR0B2Q15466 257 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 TPSAB1Q15661 275 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 CCDC157Q569K6 752 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 GPRC6AQ5T6X5 926 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 SLC30A9Q6PML9 568 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 XKR5Q6UX68 686 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 PPP1R21Q6ZMI0 780 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 GALNT13Q8IUC8 556 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 PHYKPLQ8IUZ5 450 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 PIANPQ8IYJ0 282 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 ARL10Q8N8L6 244 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 RASGEF1AQ8N9B8 481 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 DDHD1Q8NEL9 900 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 OR13J1Q8NGT2 312 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 IFI44Q8TCB0 444 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 NAT14Q8WUY8 206 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 PATE1Q8WXA2 126 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 CPT1BQ92523 772 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 SLCO2A1Q92959 643 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 CDKN2AIPNLQ96HQ2 116 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 CAPZA3Q96KX2 299 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 RANBP9Q96S59 729 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 SCNM1Q9BWG6 230 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 TMEM121BQ9BXQ6 578 aaPredicted RBP8.44□□□□□ -1.06
UBR1-204ENST00000563239 GSDMCQ9BYG8 508 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 DDX47Q9H0S4 455 aaKnown RBP8.44□□□□□ -1.06
UBR1-204ENST00000563239 FAM96AQ9H5X1 160 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 RMI1Q9H9A7 625 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 SIRPGQ9P1W8 387 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 GULP1Q9UBP9 304 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 SLC2A6Q9UGQ3 507 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 PADI4Q9UM07 663 aa8.44□□□□□ -1.06
UBR1-204ENST00000563239 COL27A1Q8IZC6 1860 aaPredicted RBP8.44□□□□□ -1.06
UBR1-204ENST00000563239 TRBV5-4A0A0C4DH59 114 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 CCDC162PA2VCL2 907 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 CPED1A4D0V7 1026 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 B4DGG1 531 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 GPR89AB7ZAQ6 455 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 OPA1O60313 960 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 GP1BAP07359 652 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 GPR89BP0CG08 455 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 ACP5P13686 325 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 ADRA1DP25100 572 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 IVDP26440 423 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 MC4RP32245 332 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 ACTR1BP42025 376 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 LMAN1P49257 510 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 DUSP3P51452 185 aaPredicted RBP8.43□□□□□ -1.06
UBR1-204ENST00000563239 CLCNKAP51800 687 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 TERF1P54274 439 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 MAZP56270 477 aaKnown RBP8.43□□□□□ -1.06
UBR1-204ENST00000563239 SESN2P58004 480 aaPredicted RBP8.43□□□□□ -1.06
UBR1-204ENST00000563239 ACTR1AP61163 376 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 CRADDP78560 199 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 DAB2P98082 770 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 CDK16Q00536 496 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 ITGA9Q13797 1035 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 LRP8Q14114 963 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 SEPT6Q14141 434 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 HS1BP3Q53T59 392 aa8.43□□□□□ -1.06
UBR1-204ENST00000563239 LDLRAP1Q5SW96 308 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms