RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 LYSMD3Q7Z3D4 306 aa11.52□□□□□ -0.57
NSMCE1-202ENST00000561960 ZNF571Q7Z3V5 609 aaPredicted RBP11.52□□□□□ -0.57
NSMCE1-202ENST00000561960 PHYKPLQ8IUZ5 450 aa11.52□□□□□ -0.57
NSMCE1-202ENST00000561960 BBS5Q8N3I7 341 aa11.52□□□□□ -0.57
NSMCE1-202ENST00000561960 NSMCE1Q8WV22 266 aa11.52□□□□□ -0.57
NSMCE1-202ENST00000561960 SYT11Q9BT88 431 aa11.52□□□□□ -0.57
NSMCE1-202ENST00000561960 EFHD1Q9BUP0 239 aa11.52□□□□□ -0.57
NSMCE1-202ENST00000561960 SPATA16Q9BXB7 569 aa11.52□□□□□ -0.57
NSMCE1-202ENST00000561960 HAUS4Q9H6D7 363 aa11.52□□□□□ -0.57
NSMCE1-202ENST00000561960 DONSONQ9NYP3 566 aa11.52□□□□□ -0.57
NSMCE1-202ENST00000561960 ZNF624Q9P2J8 865 aaPredicted RBP11.52□□□□□ -0.57
NSMCE1-202ENST00000561960 SHOC2Q9UQ13 582 aa11.52□□□□□ -0.57
NSMCE1-202ENST00000561960 KRT86O43790 486 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 FZD6O60353 706 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 PRLP01236 227 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 VIPP01282 170 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 EBLN1P0CF75 366 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 FOLR1P15328 257 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 FERP16591 822 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 TEAD1P28347 426 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 HSPA9P38646 679 aaKnown RBP11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 SLC19A1P41440 591 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 ARCN1P48444 511 aaKnown RBP11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 PMS2P54278 862 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 PEX6Q13608 980 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 GPR18Q14330 331 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 KRT81Q14533 505 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 ATP13A4Q4VNC1 1196 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 KHDC1Q4VXA5 237 aaKnown RBP11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 PRAMEF17Q5VTA0 474 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 SMYD5Q6GMV2 418 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 PWWP2BQ6NUJ5 590 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 FBXO38Q6PIJ6 1188 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 PLXDC1Q8IUK5 500 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 PRR7Q8TB68 274 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 ENOX1Q8TC92 643 aaKnown RBP11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 SSC4DQ8WTU2 575 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 EID2BQ96D98 161 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 ZPBPQ9BS86 351 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 TDRD1Q9BXT4 1180 aaKnown RBP11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 TRIT1Q9H3H1 467 aaKnown RBP11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 RBM22Q9NW64 420 aaKnown RBP eCLIP11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 PSMD13Q9UNM6 376 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 FER1L5A0AVI2 2057 aa11.51□□□□□ -0.57
NSMCE1-202ENST00000561960 CELSR1Q9NYQ6 3014 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 IGHV5-51A0A0C4DH38 117 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 F5H423 210 aaPredicted RBP11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 DDX3XO00571 662 aaKnown RBP eCLIP11.5□□□□□ -0.579e-19■■■■□ 20.6
NSMCE1-202ENST00000561960 GPR39O43194 453 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 NUAK1O60285 661 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 CLDN1O95832 211 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 BRAFP15056 766 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 CDK11BP21127 795 aaKnown RBP11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 NFKBIAP25963 317 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 HNRNPH3P31942 346 aaKnown RBP11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 CD86P42081 329 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 SPINT3P49223 89 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 PGDP52209 483 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 EPHA4P54764 986 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 CDH6P55285 790 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 ASIC2Q16515 512 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 DPYSL2Q16555 572 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 QPCTQ16769 361 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 HENMT1Q5T8I9 393 aaKnown RBP11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 LCN10Q6JVE6 187 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 TMEM26Q6ZUK4 368 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 GPR26Q8NDV2 337 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 GPR150Q8NGU9 434 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 SH3KBP1Q96B97 665 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 C19orf60Q96EN9 201 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 PPM1MQ96MI6 270 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 HERPUD2Q9BSE4 406 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 MLPHQ9BV36 600 aaPredicted RBP11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 POLR1EQ9GZS1 481 aaKnown RBP11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 FAM83DQ9H4H8 585 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 PCDH9Q9HC56 1237 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 LHX9Q9NQ69 397 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 FAM8A1Q9UBU6 413 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 LIMA1Q9UHB6 759 aaKnown RBP11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 WDR37Q9Y2I8 494 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 PPIL1Q9Y3C6 166 aa11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 CFAP20Q9Y6A4 193 aaKnown RBP11.5□□□□□ -0.57
NSMCE1-202ENST00000561960 AKAP9Q99996 3911 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 ABCA12Q86UK0 2595 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 KIR2DS5A0A0G2JLQ3 304 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 A0A0G2JNG1 304 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 A0A1W2PQ67 120 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 LILRA5A6NI73 299 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 TCP11X1B4DZS4 312 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 KIR2DS3K7RE56 304 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 MASP2O00187 686 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 SLC25A14O95258 325 aaPredicted RBP11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 C9P02748 559 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 CCNYL3P0C7X3 344 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 ZNF30P17039 623 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 PBLDP30039 288 aaPredicted RBP11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 PTGIRP43119 386 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 HCAR3P49019 387 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 TUBB3Q13509 450 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 SEMA5AQ13591 1074 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms