RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ZNF7P17097 686 aaPredicted RBP9.72□□□□□ -0.85
SMG1-205ENST00000561947 ITGALP20701 1170 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 SERPINA4P29622 427 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 CCR2P41597 374 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 DPP6P42658 865 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 CTSOP43234 321 aaPredicted RBP9.72□□□□□ -0.85
SMG1-205ENST00000561947 HK3P52790 923 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 ERVFC1P60507 584 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 STX1BP61266 288 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 SNRPD1P62314 119 aaKnown RBP9.72□□□□□ -0.85
SMG1-205ENST00000561947 REP15Q6BDI9 236 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 DHDDSQ86SQ9 333 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 ZSWIM9Q86XI8 627 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 HIPK4Q8NE63 616 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 PDLIM5Q96HC4 596 aaKnown RBP9.72□□□□□ -0.85
SMG1-205ENST00000561947 CLPBQ9H078 707 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 TUBB1Q9H4B7 451 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 ASB8Q9H765 288 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 FBRSL1Q9HCM7 1045 aaKnown RBP9.72□□□□□ -0.85
SMG1-205ENST00000561947 HCFC1R1Q9NWW0 138 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 CCDC167Q9P0B6 97 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 APPL1Q9UKG1 709 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 PCTPQ9UKL6 214 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 CCL26Q9Y258 94 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 PTGDR2Q9Y5Y4 395 aa9.72□□□□□ -0.85
SMG1-205ENST00000561947 TRBV5-4A0A0C4DH59 114 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 SNX2O60749 519 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 CA5AP35218 305 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 ACADVLP49748 655 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 STK19P49842 368 aaPredicted RBP9.71□□□□□ -0.85
SMG1-205ENST00000561947 AGTR2P50052 363 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 PKNOX1P55347 436 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 NFATC2Q13469 925 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 CEACAM7Q14002 265 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 FBXO48Q5FWF7 155 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 PTRHD1Q6GMV3 140 aaKnown RBP9.71□□□□□ -0.85
SMG1-205ENST00000561947 FBXO46Q6PJ61 603 aaPredicted RBP9.71□□□□□ -0.85
SMG1-205ENST00000561947 RNF111Q6ZNA4 994 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 NECAB2Q7Z6G3 386 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 KBTBD6Q86V97 674 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 PHYKPLQ8IUZ5 450 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 DDIASQ8IXT1 998 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 KBTBD2Q8IY47 623 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 RBFAQ8N0V3 343 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 CCDC97Q96F63 343 aaPredicted RBP9.71□□□□□ -0.85
SMG1-205ENST00000561947 RPL10LQ96L21 214 aaKnown RBP9.71□□□□□ -0.85
SMG1-205ENST00000561947 ZNF184Q99676 751 aaPredicted RBP9.71□□□□□ -0.85
SMG1-205ENST00000561947 SLC25A23Q9BV35 468 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 IL26Q9NPH9 171 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 NUDT4Q9NZJ9 180 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 CD274Q9NZQ7 290 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 GNPTGQ9UJJ9 305 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 INSL6Q9Y581 213 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 IRAK3Q9Y616 596 aa9.71□□□□□ -0.85
SMG1-205ENST00000561947 GLYATL1P3A0A0U1RQE8 302 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 A0A1B0GTL3 188 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 FBP2O00757 339 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 CRCPO75575 148 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 CSPG5O95196 566 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 MLYCDO95822 493 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 BPIP17213 487 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 XRCC1P18887 633 aaPredicted RBP9.71□□□□□ -0.86
SMG1-205ENST00000561947 ME2P23368 584 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 DDX6P26196 483 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMG1-205ENST00000561947 HLA-FP30511 346 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 PSME3P61289 254 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 CDC16Q13042 620 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 LRP8Q14114 963 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 MMEL1Q495T6 779 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 FUT11Q495W5 492 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 LYPLAL1Q5VWZ2 237 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 PLPP4Q5VZY2 271 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 C22orf39Q6P5X5 142 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 CBARPQ8N350 705 aaPredicted RBP9.71□□□□□ -0.86
SMG1-205ENST00000561947 RIN3Q8TB24 985 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 VOPP1Q96AW1 172 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 ISG20Q96AZ6 181 aaKnown RBP9.71□□□□□ -0.86
SMG1-205ENST00000561947 TUBGCP5Q96RT8 1024 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 LYSMD1Q96S90 227 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 BOCQ9BWV1 1114 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 NUSAP1Q9BXS6 441 aaKnown RBP9.71□□□□□ -0.86
SMG1-205ENST00000561947 BATF3Q9NR55 127 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 WBP1LQ9NX94 342 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 CACNA2D2Q9NY47 1150 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 BCAP29Q9UHQ4 241 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 SARDHQ9UL12 918 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 HS3ST2Q9Y278 367 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 LRCH1Q9Y2L9 728 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 PCDHGA7Q9Y5G6 932 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 PLXNB3Q9ULL4 1909 aa9.71□□□□□ -0.86
SMG1-205ENST00000561947 HIDE1A8MVS5 230 aa9.7□□□□□ -0.86
SMG1-205ENST00000561947 H3BNX3 289 aa9.7□□□□□ -0.86
SMG1-205ENST00000561947 GRM6O15303 877 aa9.7□□□□□ -0.86
SMG1-205ENST00000561947 VPS4BO75351 444 aa9.7□□□□□ -0.86
SMG1-205ENST00000561947 FGF19O95750 216 aa9.7□□□□□ -0.86
SMG1-205ENST00000561947 FGBP02675 491 aa9.7□□□□□ -0.86
SMG1-205ENST00000561947 LBPP18428 481 aa9.7□□□□□ -0.86
SMG1-205ENST00000561947 GPX3P22352 226 aa9.7□□□□□ -0.86
SMG1-205ENST00000561947 ACRV1P26436 265 aa9.7□□□□□ -0.86
SMG1-205ENST00000561947 SPAM1P38567 509 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms