RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 SCCPDHQ8NBX0 429 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 BEST2Q8NFU1 509 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 GABPB2Q8TAK5 448 aaPredicted RBP3.81□□□□□ -1.8
HERC1-215ENST00000561436 RAET1EQ8TD07 263 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 ARHGEF26Q96DR7 871 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 PGAM5Q96HS1 289 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 SLITRK1Q96PX8 696 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 PARK7Q99497 189 aaKnown RBP3.81□□□□□ -1.8
HERC1-215ENST00000561436 TMEM47Q9BQJ4 181 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 MMTAG2Q9BU76 263 aaKnown RBP3.81□□□□□ -1.8
HERC1-215ENST00000561436 IFIH1Q9BYX4 1025 aaKnown RBP3.81□□□□□ -1.8
HERC1-215ENST00000561436 FOXP1Q9H334 677 aaPredicted RBP3.81□□□□□ -1.8
HERC1-215ENST00000561436 MAGEE1Q9HCI5 957 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 KRCC1Q9NPI7 259 aaPredicted RBP3.81□□□□□ -1.8
HERC1-215ENST00000561436 PLK2Q9NYY3 685 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 HEY2Q9UBP5 337 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 ADD3Q9UEY8 706 aaKnown RBP3.81□□□□□ -1.8
HERC1-215ENST00000561436 PCDHA12Q9UN75 941 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 ERVK-11Q9UQG0 969 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 MAU2Q9Y6X3 613 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 A3GALT2U3KPV4 340 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 SLX4Q8IY92 1834 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 RGPD2P0DJD1 1756 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 PAPPA2Q9BXP8 1791 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 SBF1O95248 1867 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 KIF16BQ96L93 1317 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 VIRMAQ69YN4 1812 aaKnown RBP3.8□□□□□ -1.8
HERC1-215ENST00000561436 A0A0G2JK05 382 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 KDM4EB2RXH2 506 aaPredicted RBP3.8□□□□□ -1.8
HERC1-215ENST00000561436 ZNF814B7Z6K7 855 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 MS4A18H0YCH9 400 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 TIMM44O43615 452 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 NDUFB8O95169 186 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 CYP1A2P05177 515 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 RB1P06400 928 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 MMP2P08253 660 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 CSH1P0DML2 217 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 CSH2P0DML3 217 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 DCTDP32321 178 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 PPP3CCP48454 512 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 NLRP5P59047 1200 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 EPS8Q12929 822 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 ACVR2BQ13705 512 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 VGLL4Q14135 290 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 GPR18Q14330 331 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 GCKRQ14397 625 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 PTGR1Q14914 329 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 ADIPOQQ15848 244 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 USP41Q3LFD5 358 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 PLEKHS1Q5SXH7 462 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 MFSD4BQ5TF39 518 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 TMEM71Q6P5X7 295 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 MON1BQ7L1V2 547 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 LINGO2Q7L985 606 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 PIP4P1Q86T03 277 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 PIM3Q86V86 326 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 MB21D2Q8IYB1 491 aaPredicted RBP3.8□□□□□ -1.8
HERC1-215ENST00000561436 HACE1Q8IYU2 909 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 MMP21Q8N119 569 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 C17orf53Q8N3J3 647 aaPredicted RBP3.8□□□□□ -1.8
HERC1-215ENST00000561436 TMEM199Q8N511 208 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 WDTC1Q8N5D0 677 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 TEX45Q8NA69 505 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 U2AF1L4Q8WU68 220 aaKnown RBP3.8□□□□□ -1.8
HERC1-215ENST00000561436 MMABQ96EY8 250 aaPredicted RBP3.8□□□□□ -1.8
HERC1-215ENST00000561436 RSRC1Q96IZ7 334 aaKnown RBP3.8□□□□□ -1.8
HERC1-215ENST00000561436 PRMT6Q96LA8 375 aaPredicted RBP3.8□□□□□ -1.8
HERC1-215ENST00000561436 C1orf74Q96LT6 269 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 WDR77Q9BQA1 342 aaPredicted RBP3.8□□□□□ -1.8
HERC1-215ENST00000561436 TMEM79Q9BSE2 394 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 NPFFR1Q9GZQ6 430 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 ISCUQ9H1K1 167 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 PLEKHA4Q9H4M7 779 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 MAP6D1Q9H9H5 199 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 SCPEP1Q9HB40 452 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 CYSLTR2Q9NS75 346 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 POT1Q9NUX5 634 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 TMOD2Q9NZR1 351 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 ZNF112Q9UJU3 913 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 LSM4Q9Y4Z0 139 aaKnown RBP3.8□□□□□ -1.8
HERC1-215ENST00000561436 SNX8Q9Y5X2 465 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 CACNA1IQ9P0X4 2223 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 DUOX1Q9NRD9 1551 aa3.8□□□□□ -1.8
HERC1-215ENST00000561436 SCN11AQ9UI33 1791 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 RPAP1Q9BWH6 1393 aaPredicted RBP3.79□□□□□ -1.8
HERC1-215ENST00000561436 IGLV5-39A0A0G2JS06 123 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 A0A0U1RQF3 1178 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 TMEM272A0A1B0GTI8 110 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 hCG_1807616A0A1W2PRN6 198 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 VWA5AO00534 786 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 ASAP2O43150 1006 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 HCRTR2O43614 444 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 ITM2AO43736 263 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 TMCC2O75069 709 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 RGS11O94810 467 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 NKX2-2O95096 273 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 BMP15O95972 392 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 IGKV5-2P06315 115 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 CLTBP09497 229 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 ACTN1P12814 892 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms