RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 GPR1P46091 355 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 CDKN2DP55273 166 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 PPARDQ03181 441 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 UBXN2BQ14CS0 331 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 LRRC14Q15048 493 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 ZKSCAN8Q15776 578 aaPredicted RBP10.21□□□□□ -0.77
USP3-219ENST00000561326 N4BP2L1Q5TBK1 243 aaPredicted RBP10.21□□□□□ -0.77
USP3-219ENST00000561326 AGBL4Q5VU57 503 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 TBC1D3GQ6DHY5 549 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 TBC1D3CQ6IPX1 549 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 KIAA1161Q6NSJ0 714 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 RFLNAQ6ZTI6 216 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 SYT13Q7L8C5 426 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 TBC1D3Q8IZP1 549 aaPredicted RBP10.21□□□□□ -0.77
USP3-219ENST00000561326 PGBD3Q8N328 593 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 NKAPQ8N5F7 415 aaKnown RBP10.21□□□□□ -0.77
USP3-219ENST00000561326 ACVR1CQ8NER5 493 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 OR14C36Q8NHC7 312 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 BTN2A2Q8WVV5 523 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 ATXN2LQ8WWM7 1075 aaKnown RBP10.21□□□□□ -0.77
USP3-219ENST00000561326 KCNJ9Q92806 393 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 SCYL1Q96KG9 808 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 MRGPRX1Q96LB2 322 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 MAGEB18Q96M61 343 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 BIRC8Q96P09 236 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 FAM111AQ96PZ2 611 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 PANX3Q96QZ0 392 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 ZCCHC2Q9C0B9 1178 aaKnown RBP10.21□□□□□ -0.77
USP3-219ENST00000561326 P2RY12Q9H244 342 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 NMRAL1Q9HBL8 299 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 PREBQ9HCU5 417 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 SLC17A7Q9P2U7 560 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 TRMT6Q9UJA5 497 aaKnown RBP10.21□□□□□ -0.77
USP3-219ENST00000561326 IGLV3-16A0A075B6K0 115 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 CCDC189A1A4V9 331 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 GMNCA6NCL1 334 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 IGLON5A6NGN9 336 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 LRRC72A6NJI9 287 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 SHISA7A6NL88 538 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 SPINT1O43278 529 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 PLRG1O43660 514 aaKnown RBP10.2□□□□□ -0.78
USP3-219ENST00000561326 MAGEC1O60732 1142 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 SHOX2O60902 331 aaPredicted RBP10.2□□□□□ -0.78
USP3-219ENST00000561326 AP2A2O94973 939 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 CCDC166P0CW27 439 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 COL9A1P20849 921 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 LSP1P33241 339 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 RGS4P49798 205 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 CSRP3P50461 194 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 WDR4P57081 412 aaKnown RBP10.2□□□□□ -0.78
USP3-219ENST00000561326 TAS2R38P59533 333 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 IL2P60568 153 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 GABPB1Q06547 395 aaPredicted RBP10.2□□□□□ -0.78
USP3-219ENST00000561326 ASPHQ12797 758 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 ACAP2Q15057 778 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 AGERQ15109 404 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 MAP7D1Q3KQU3 841 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 EYSQ5T1H1 3165 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 GPRC6AQ5T6X5 926 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 TTC19Q6DKK2 380 aaPredicted RBP10.2□□□□□ -0.78
USP3-219ENST00000561326 KIAA1324Q6UXG2 1013 aaKnown RBP10.2□□□□□ -0.78
USP3-219ENST00000561326 TMEM92Q6UXU6 159 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 MACC1Q6ZN28 852 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 CLEC14AQ86T13 490 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 CACUL1Q86Y37 369 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 NUDCD3Q8IVD9 361 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 PNPLA1Q8N8W4 532 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 ARMC2Q8NEN0 867 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 RDH11Q8TC12 318 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 LRRC8CQ8TDW0 803 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 CKAP2Q8WWK9 683 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 INPP5DQ92835 1189 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 GLYATL1Q969I3 302 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 FAM131CQ96AQ9 280 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 UBXN10Q96LJ8 280 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 OLFM1Q99784 485 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 MRPL57Q9BQC6 102 aaKnown RBP10.2□□□□□ -0.78
USP3-219ENST00000561326 OSBPL6Q9BZF3 934 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 CCDC134Q9H6E4 229 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 CD248Q9HCU0 757 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 MLXIPLQ9NP71 852 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 LTB4R2Q9NPC1 389 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 TMEM216Q9P0N5 145 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 KLHL42Q9P2K6 505 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 COQ6Q9Y2Z9 468 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 DHRS7Q9Y394 339 aa10.2□□□□□ -0.78
USP3-219ENST00000561326 OAS3Q9Y6K5 1087 aaKnown RBP10.2□□□□□ -0.78
USP3-219ENST00000561326 CEP192Q8TEP8 1941 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 TCRBV21S2A2A0A5A6 115 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 PLIN3O60664 434 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 RNGTTO60942 597 aaKnown RBP10.19□□□□□ -0.78
USP3-219ENST00000561326 TRIM16O95361 564 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 FTH1P02794 183 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 PROCP04070 461 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 VIMP08670 466 aaKnown RBP10.19□□□□□ -0.78
USP3-219ENST00000561326 DHRS4L1P0CG22 281 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 CPA3P15088 417 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 TAC1P20366 129 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 DGKAP23743 735 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 ETV4P43268 484 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms