RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 LLGL2Q6P1M3 1020 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 KIAA1324Q6UXG2 1013 aaKnown RBP13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 GPR65Q8IYL9 337 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 XAGE5Q8WWM1 108 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 MED28Q9H204 178 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 IL1RAPQ9NPH3 570 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 IKZF2Q9UKS7 526 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 CHP2O43745 196 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 NDUFS2O75306 463 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 AP2A2O94973 939 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 RHOQP17081 205 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 ITGB5P18084 799 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 CBX3Q13185 183 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 TUSC3Q13454 348 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 LAPTM5Q13571 262 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 ITGA7Q13683 1181 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 LCN1P1Q5VSP4 162 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 IL23RQ5VWK5 629 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 CWF19L1Q69YN2 538 aaKnown RBP13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 ESRP1Q6NXG1 681 aaKnown RBP13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 PLD5Q8N7P1 536 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 OR4K2Q8NGD2 314 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 CPT1BQ92523 772 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 CALML5Q9NZT1 146 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 GLYATL1P3A0A0U1RQE8 302 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 IQCMA0A1B0GVH7 501 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 H3BM21 787 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 C22orf31O95567 290 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 UROSP10746 265 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 CCNCP24863 283 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 IGFALSP35858 605 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 POU5F1Q01860 360 aaKnown RBP13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 MPPE1Q53F39 396 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 FITM2Q8N6M3 262 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 PIK3R3Q92569 461 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 PPP1R14BQ96C90 147 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 KREMEN1Q96MU8 473 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 KLHL5Q96PQ7 755 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 KCNN2Q9H2S1 579 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 PHPT1Q9NRX4 125 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 XKRYO14609 159 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 ATG13O75143 517 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 RSL1D1O76021 490 aaKnown RBP13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 GIMD1P0DJR0 217 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 SAGP10523 405 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 MSX2P35548 267 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 TIE1P35590 1138 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 NRG1Q02297 640 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 TNS2Q63HR2 1409 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 CBR4Q8N4T8 237 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 ZNF563Q8TA94 476 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 NAT14Q8WUY8 206 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 IRGQQ8WZA9 623 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 NXNL1Q96CM4 212 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 TRNT1Q96Q11 434 aaKnown RBP13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 PHF12Q96QT6 1004 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 PCDHB18PQ96TA0 734 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 CDADC1Q9BWV3 514 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 EXO5Q9H790 373 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 FBXL21Q9UKT6 434 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 SNX7Q9UNH6 387 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 GRIP1Q9Y3R0 1128 aa13.12□□□□□ -0.31
CSPG4P11-201ENST00000560634 FRMPD1Q5SYB0 1578 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 FPGTO14772 594 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 ATXN7L2Q5T6C5 722 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 RASSF6Q6ZTQ3 369 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 SIX5Q8N196 739 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 FCGR1BQ92637 280 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 COPS5Q92905 334 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 ALG2Q9H553 416 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 NPEPPSL1A6NEC2 478 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 RIIAD1A6NNX1 92 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 SLC22A2O15244 555 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 AIREO43918 545 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 PLIN3O60664 434 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 RGS8P57771 180 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 CACNG1Q06432 222 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 TEAD4Q15561 434 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 TMEM44Q2T9K0 475 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 SNX20Q7Z614 316 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 PARP8Q8N3A8 854 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 VGLL2Q8N8G2 317 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 C12orf50Q8NA57 414 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 DNAJB8Q8NHS0 232 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 LENG8Q96PV6 779 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 DENND2DQ9H6A0 471 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 IPPKQ9H8X2 491 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 FKBP14Q9NWM8 211 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 FAM198AQ9UFP1 575 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 GRM6O15303 877 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 FGF19O95750 216 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 SP100P23497 879 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 PTPN9P43378 593 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 TUBA4AP68366 448 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 IL17AQ16552 155 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 C9orf57Q5W0N0 161 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 JAZF1Q86VZ6 243 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 ZBTB2Q8N680 514 aa13.11□□□□□ -0.31
CSPG4P11-201ENST00000560634 GLB1L3Q8NCI6 653 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms