RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 RNF112Q9ULX5 631 aa10.77□□□□□ -0.68
SNRPA1-211ENST00000560433 SUPT3HB4E1H0 165 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 FCHO1O14526 889 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 ZNF195O14628 629 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 SUPT3HO75486 399 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 DCTN3O75935 186 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 KAT7O95251 611 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 PAPLNO95428 1278 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 T-ENOLP0DO92 83 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 MTHFD2P13995 350 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 CD1EP15812 388 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 ZNF7P17097 686 aaPredicted RBP10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 EPHA3P29320 983 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 NCALDP61601 193 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 KCNJ2P63252 427 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 ACTN3Q08043 901 aaPredicted RBP10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 RCN2Q14257 317 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 C18orf21Q32NC0 220 aaPredicted RBP10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 LACTB2Q53H82 288 aaPredicted RBP10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 SH2D4BQ5SQS7 431 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 BRAT1Q6PJG6 821 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 NXPE1Q8N323 547 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 PHTF2Q8N3S3 785 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 BEND7Q8N7W2 519 aaPredicted RBP10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 PTGR2Q8N8N7 351 aaPredicted RBP10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 PIP4K2CQ8TBX8 421 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 RDH11Q8TC12 318 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 ARRDC3Q96B67 414 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 SKA1Q96BD8 255 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 CDH19Q9H159 772 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 TTYH1Q9H313 450 aaPredicted RBP10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 ARL8BQ9NVJ2 186 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 KCNK4Q9NYG8 393 aa10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 OAS3Q9Y6K5 1087 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-211ENST00000560433 DOCK9Q9BZ29 2069 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 A0A1B0GTL3 188 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 UPK3BL1B0FP48 263 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 UPK3BL2E5RIL1 263 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 E9PBE3 544 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 UBFD1O14562 309 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 PFDN6O15212 129 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 KLHL41O60662 606 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 SKAP2O75563 359 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 PYGLP06737 847 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 GFAPP14136 432 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 AGTR2P50052 363 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 IDH3AP50213 366 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 KPNA2P52292 529 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 PDGFRLQ15198 375 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 CTC1Q2NKJ3 1217 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 HNRNPA1L2Q32P51 320 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 KHDC1Q4VXA5 237 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 CPA6Q8N4T0 437 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 DCBLD1Q8N8Z6 715 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 WFIKKN2Q8TEU8 576 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 FUBP1Q96AE4 644 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 OR52B2Q96RD2 323 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 ATOH8Q96SQ7 321 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 FAM129BQ96TA1 746 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 PLCD4Q9BRC7 762 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 TRMT61BQ9BVS5 477 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 ILKAPQ9H0C8 392 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 SYTL2Q9HCH5 934 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 MID2Q9UJV3 735 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 CORO1CQ9ULV4 474 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 ASB1Q9Y576 335 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 KRT87PA6NCN2 255 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 H0YHG0 523 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 INPP4BO15327 924 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 ECI2O75521 394 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 GUCA1CO95843 209 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 ESR1P03372 595 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 ASLP04424 464 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 NCF2P19878 526 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 RPL14P50914 215 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 HK3P52790 923 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 PRKAA2P54646 552 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 IL2P60568 153 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 CREB5Q02930 508 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 RALGDSQ12967 914 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 TUBB3Q13509 450 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 ACOX1Q15067 660 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 CLEC6AQ6EIG7 209 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 FBXL19Q6PCT2 694 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 TXNDC11Q6PKC3 985 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 LCA5Q86VQ0 697 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 TREML1Q86YW5 311 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 RBFAQ8N0V3 343 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 KCNJ9Q92806 393 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 MARK4Q96L34 752 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 RIOK2Q9BVS4 552 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 ZMYND15Q9H091 742 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 TMEM245Q9H330 911 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 PLXNB3Q9ULL4 1909 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 ATXN2Q99700 1313 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 MUC3AQ02505 3323 aa10.76□□□□□ -0.69
SNRPA1-211ENST00000560433 TRBV5-4A0A0C4DH59 114 aa10.75□□□□□ -0.69
SNRPA1-211ENST00000560433 CXorf51AA0A1B0GTR3 108 aa10.75□□□□□ -0.69
SNRPA1-211ENST00000560433 CCDC189A1A4V9 331 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms