RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	LYSMD3	Q7Z3D4	306 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	AMIGO2	Q86SJ2	522 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	PQLC1	Q8N2U9	271 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	TTC30B	Q8N4P2	665 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	CLDN19	Q8N6F1	224 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	TMEM102	Q8N9M5	508 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	OR52B6	Q8NGF0	335 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	GPR150	Q8NGU9	434 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	LRTOMT	Q8WZ04	291 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	SEPT8	Q92599	483 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	VOPP1	Q96AW1	172 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	VPS33A	Q96AX1	596 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	DGCR14	Q96DF8	476 aa	Known RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	TSPAN17	Q96FV3	270 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	IGSF21	Q96ID5	467 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	PRPF18	Q99633	342 aa	Known RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	C1orf50	Q9BV19	199 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	MAGEH1	Q9H213	219 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	TNKS2	Q9H2K2	1166 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	PIF1	Q9H611	641 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	LIN28A	Q9H9Z2	209 aa	Known RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	SEPT3	Q9UH03	358 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	EGFL7	Q9UHF1	273 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	POLG2	Q9UHN1	485 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	EIF2B4	Q9UI10	523 aa	Known RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	YIPF1	Q9Y548	306 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	ATG2B	Q96BY7	2078 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	SMIM31	A0A1B0GVY4	71 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	SLCO1B7	G3V0H7	640 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369		H3BSA7	217 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	NME4	O00746	187 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	GAPDHS	O14556	408 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	MRAS	O14807	208 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	PEX1	O43933	1283 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	GPC4	O75487	556 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	BCAS2	O75934	225 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	HSPA1A	P0DMV8	641 aa	Known RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	HSPA1B	P0DMV9	641 aa	Known RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	MBL2	P11226	248 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	ATP6V1B2	P21281	511 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	CTSO	P43234	321 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	PIK3CG	P48736	1102 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	SLC11A2	P49281	568 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	HTR6	P50406	440 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	SLC7A2	P52569	658 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	SMAD3	P84022	425 aa	Known RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	HPCA	P84074	193 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	XIAP	P98170	497 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	CLC	Q05315	142 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	ZNF177	Q13360	481 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	TMED1	Q13445	227 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	NRF1	Q16656	503 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	USP41	Q3LFD5	358 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	TRIM60	Q495X7	471 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	SPOUT1	Q5T280	376 aa	Known RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	ADGRF1	Q5T601	910 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	KIAA1841	Q6NSI8	718 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	MRNIP	Q6NTE8	343 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	FAM151B	Q6UXP7	276 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	B3GNT6	Q6ZMB0	384 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	RNF168	Q8IYW5	571 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	RIN3	Q8TB24	985 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	GRIN3A	Q8TCU5	1115 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	CD200R1	Q8TD46	325 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	PXYLP1	Q8TE99	480 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	ALG14	Q96F25	216 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	LINGO1	Q96FE5	620 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	SLC29A1	Q99808	456 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	FEM1A	Q9BSK4	669 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	HIPK3	Q9H422	1215 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	SLC52A3	Q9NQ40	469 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	CHCHD3	Q9NX63	227 aa	Known RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	EVL	Q9UI08	416 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	VPS51	Q9UID3	782 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	RNF112	Q9ULX5	631 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	TMCO1	Q9UM00	188 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	PSMD13	Q9UNM6	376 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	MYO9B	Q13459	2157 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	LRRK1	Q38SD2	2015 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	GOLGA4	Q13439	2230 aa	Known RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	CCDC88C	Q9P219	2028 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369		A0A0J9YVX5	310 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369		A0A0J9YYE9	177 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369	PRSS51	A0A1B0GVH4	220 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369	C7orf72	A4D263	438 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369	FAM149A	A5PLN7	773 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369	ZNF839	A8K0R7	811 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369		H0Y626	953 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369		H7C4K7	107 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369	PDLIM1	O00151	329 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369	FXYD1	O00168	92 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369	PLOD2	O00469	737 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369	CASQ2	O14958	399 aa	Predicted RBP	5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369	AZIN1	O14977	448 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369	NDUFS3	O75489	264 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369	ABLIM3	O94929	683 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369	OR4F21	O95013	312 aa		5.71	□□□□□ -1.49
LRRC49-223	ENST00000560369	PENK	P01210	267 aa	Predicted RBP	5.71	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms