RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ZNF761Q86XN6 746 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 PHYKPLQ8IUZ5 450 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 ZNF547Q8IVP9 402 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 KLHDC8BQ8IXV7 354 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 TTC13Q8NBP0 860 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 WDR48Q8TAF3 677 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 SLC37A2Q8TED4 501 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 CRELD1Q96HD1 420 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 CARD9Q9H257 536 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 RMI1Q9H9A7 625 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 RDH14Q9HBH5 336 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 EPB41L5Q9HCM4 733 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 ASCL3Q9NQ33 180 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 HACD3Q9P035 362 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 AAR2Q9Y312 384 aaKnown RBP11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 LOC400499M0QZD8 3231 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 MGAQ8IWI9 3026 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 A0A087WV48 116 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 GLYATL1P3A0A0U1RQE8 302 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 CCL22O00626 93 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 HGFP14210 728 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 ITPKBP27987 946 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 CD1CP29017 333 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 SPAM1P38567 509 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 EIF2S3P41091 472 aaKnown RBP11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 INHBCP55103 352 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 PRPSAP1Q14558 356 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 NR1D2Q14995 579 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 RPS6KA1Q15418 735 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 COL28A1Q2UY09 1125 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 TBC1D25Q3MII6 688 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 NKAIN2Q5VXU1 208 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 KCTD11Q693B1 232 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 PDPK2PQ6A1A2 396 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 ZNF574Q6ZN55 896 aaPredicted RBP11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 ZNF662Q6ZS27 426 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 ARHGEF18Q6ZSZ5 1173 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 PRUNE1Q86TP1 453 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 SLC13A5Q86YT5 568 aaPredicted RBP11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 SFRP1Q8N474 314 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 NAT14Q8WUY8 206 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 C1orf54Q8WWF1 131 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 FGF11Q92914 225 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 VPS35Q96QK1 796 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 TBL1YQ9BQ87 522 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 NUDT22Q9BRQ3 303 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 SEMA6CQ9H3T2 930 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 PRDM8Q9NQV8 689 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 KLC4Q9NSK0 619 aa11.5□□□□□ -0.57
RABGGTA-216ENST00000560243 CCDC187A0A096LP49 1063 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 PRR19A6NJB7 356 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 STX7O15400 261 aaKnown RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 LIASO43766 372 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 VEGFDO43915 354 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 DXOO77932 396 aaKnown RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 CDK14O94921 469 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 HOXB3P14651 431 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 TPH1P17752 444 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 LPOP22079 712 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 CSF2RBP32927 897 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 CTSCP53634 463 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 CFHR1Q03591 330 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 ZFP36L1Q07352 338 aaKnown RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 TMEM115Q12893 351 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 NFATC2Q13469 925 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 BIRC2Q13490 618 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 SNX1Q13596 522 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 SIX1Q15475 284 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 TAF1AQ15573 450 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 OASLQ15646 514 aaKnown RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 KCTD19Q17RG1 926 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 PARP6Q2NL67 630 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 SEL1L2Q5TEA6 688 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 IYDQ6PHW0 289 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 C11orf96Q7Z7L8 435 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 SLITRK4Q8IW52 837 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 RASGEF1AQ8N9B8 481 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 OR4K2Q8NGD2 314 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 OR13C4Q8NGS5 318 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 SNIP1Q8TAD8 396 aaKnown RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 GDAP1Q8TB36 358 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 GRAMD1AQ96CP6 724 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 CCDC97Q96F63 343 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 NAF1Q96HR8 494 aaKnown RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 SLC46A1Q96NT5 459 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 TLR10Q9BXR5 811 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 OSGEPL1Q9H4B0 414 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 GRPEL1Q9HAV7 217 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 ARNT2Q9HBZ2 717 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 PIH1D1Q9NWS0 290 aaKnown RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 SCHIP1Q9P0W5 487 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 FKBPLQ9UIM3 349 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 DNAJC16Q9Y2G8 782 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 PPP2R2CQ9Y2T4 447 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 PKP3Q9Y446 797 aa11.49□□□□□ -0.57
RABGGTA-216ENST00000560243 IGHV1OR21-1A0A087WYE8 117 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 C2orf81A6NN90 581 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 TNFSF15O95150 251 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 PRAMEF1O95521 474 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms