RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 CDK3Q00526 305 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 ITIH4Q14624 930 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 KHDC1Q4VXA5 237 aaKnown RBP10.33□□□□□ -0.76
TPM1-221ENST00000559831 LDLRAP1Q5SW96 308 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 DOK6Q6PKX4 331 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 ADAMTSL4Q6UY14 1074 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 ARMCX6Q7L4S7 300 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 BMP8AQ7Z5Y6 402 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 WDR5BQ86VZ2 330 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 NLRP8Q86W28 1048 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 LONP2Q86WA8 852 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 SLC41A1Q8IVJ1 513 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 MAML2Q8IZL2 1156 aaPredicted RBP10.33□□□□□ -0.76
TPM1-221ENST00000559831 DCLK2Q8N568 766 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 DENND6BQ8NEG7 585 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 DDHD1Q8NEL9 900 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 SCG3Q8WXD2 468 aaKnown RBP10.33□□□□□ -0.76
TPM1-221ENST00000559831 CENPTQ96BT3 561 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 BIRC7Q96CA5 298 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 HIC2Q96JB3 615 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 KLF6Q99612 283 aaPredicted RBP10.33□□□□□ -0.76
TPM1-221ENST00000559831 WDR26Q9H7D7 661 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 PHPT1Q9NRX4 125 aaPredicted RBP10.33□□□□□ -0.76
TPM1-221ENST00000559831 SMOXQ9NWM0 555 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 LGALS13Q9UHV8 139 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 SLC39A10Q9ULF5 831 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 CNOT6Q9ULM6 557 aaKnown RBP10.33□□□□□ -0.76
TPM1-221ENST00000559831 OR1A2Q9Y585 309 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 PRSS21Q9Y6M0 314 aa10.33□□□□□ -0.76
TPM1-221ENST00000559831 TRIOO75962 3097 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 CCDC163A0A0D9SF12 145 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 PRMT5O14744 637 aaPredicted RBP10.32□□□□□ -0.76
TPM1-221ENST00000559831 LATO43561 262 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 RHOBTB1O94844 696 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 MT-ND3P03897 115 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 ATXN8OSP0DMR3 200 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 PKMP14618 531 aaKnown RBP10.32□□□□□ -0.76
TPM1-221ENST00000559831 ITGB6P18564 788 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 ATP5DP30049 168 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 HOXA6P31267 233 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 NSG1P42857 185 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 B4GALNT1Q00973 533 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 GPS2Q13227 327 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 GTF2H3Q13889 308 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 USP10Q14694 798 aaKnown RBP10.32□□□□□ -0.76
TPM1-221ENST00000559831 CTSL3PQ5NE16 218 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 HECTD2Q5U5R9 776 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 PTRHD1Q6GMV3 140 aaKnown RBP10.32□□□□□ -0.76
TPM1-221ENST00000559831 ZNF549Q6P9A3 640 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 TMEFF1Q8IYR6 380 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 ACVR1CQ8NER5 493 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 ARL8AQ96BM9 186 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 FAM136AQ96C01 138 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 MTBPQ96DY7 904 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 SERAC1Q96JX3 654 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 HSPA12BQ96MM6 686 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 GPR22Q99680 433 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 SH3GL2Q99962 352 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 MCMBPQ9BTE3 642 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 AARSD1Q9BTE6 412 aaKnown RBP10.32□□□□□ -0.76
TPM1-221ENST00000559831 APOOQ9BUR5 198 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 STMN4Q9H169 189 aaPredicted RBP10.32□□□□□ -0.76
TPM1-221ENST00000559831 OR2AG1Q9H205 316 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 CAB39LQ9H9S4 337 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 EBF2Q9HAK2 575 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 EURLQ9NYK6 297 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 GNPTGQ9UJJ9 305 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 CORO1CQ9ULV4 474 aaPredicted RBP10.32□□□□□ -0.76
TPM1-221ENST00000559831 NOVA2Q9UNW9 492 aaKnown RBP10.32□□□□□ -0.76
TPM1-221ENST00000559831 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.32□□□□□ -0.76
TPM1-221ENST00000559831 TMEM98Q9Y2Y6 226 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 PCDHB1Q9Y5F3 818 aa10.32□□□□□ -0.76
TPM1-221ENST00000559831 OAS3Q9Y6K5 1087 aaKnown RBP10.32□□□□□ -0.76
TPM1-221ENST00000559831 TTC28Q96AY4 2481 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 TNRC6BQ9UPQ9 1833 aaKnown RBP10.31□□□□□ -0.76
TPM1-221ENST00000559831 BDP1A6H8Y1 2624 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 IGLV3-16A0A075B6K0 115 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 A0A1W2PPC4 97 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 A0A1W2PPM1 405 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 HMX2A2RU54 273 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 POM121BA6NF01 834 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 OR2AG2A6NM03 316 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 IQCF5A8MTL0 148 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 METTL12A8MUP2 240 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 E5RI56 91 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 PRAMEF26H0Y7S4 382 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 H0Y8X5 98 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 GOLGA8RI6L899 631 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 CACNB4O00305 520 aaPredicted RBP10.31□□□□□ -0.76
TPM1-221ENST00000559831 TPP1O14773 563 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 NIPSNAP2O75323 286 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 ESR1P03372 595 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 OR56A5P0C7T3 313 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 ATP1B2P14415 290 aaPredicted RBP10.31□□□□□ -0.76
TPM1-221ENST00000559831 RPS3P23396 243 aaKnown RBP eCLIP10.31□□□□□ -0.76
TPM1-221ENST00000559831 TEAD1P28347 426 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 NUDT1P36639 197 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 SERPINB8P50452 374 aa10.31□□□□□ -0.76
TPM1-221ENST00000559831 PGGT1BP53609 377 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms