RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TMCO4Q5TGY1 634 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 NKAIN2Q5VXU1 208 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 SLC30A9Q6PML9 568 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 POLNQ7Z5Q5 900 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 PIM3Q86V86 326 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 PSTKQ8IV42 348 aaKnown RBP5.77□□□□□ -1.49
USP3-215ENST00000559771 FNIP1Q8TF40 1166 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 JPH3Q8WXH2 748 aaPredicted RBP5.77□□□□□ -1.49
USP3-215ENST00000559771 TMEM159Q96B96 161 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 NUS1Q96E22 293 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 SCRN2Q96FV2 425 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 CCDC74BQ96LY2 380 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 ZNF599Q96NL3 588 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 CSPG4P5Q96PW8 444 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 WDR24Q96S15 920 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 EIF3CQ99613 913 aaKnown RBP5.77□□□□□ -1.49
USP3-215ENST00000559771 CMKLR1Q99788 373 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 MGME1Q9BQP7 344 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 ABCG8Q9H221 673 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 HAUS4Q9H6D7 363 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 SUDS3Q9H7L9 328 aaPredicted RBP5.77□□□□□ -1.49
USP3-215ENST00000559771 SP110Q9HB58 689 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 PARVAQ9NVD7 372 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 TRNAU1APQ9NX07 287 aaKnown RBP5.77□□□□□ -1.49
USP3-215ENST00000559771 OCIAD1Q9NX40 245 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 PDP2Q9P2J9 529 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 SEPT3Q9UH03 358 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 IL17BQ9UHF5 180 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 PCDHGA3Q9Y5H0 932 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 NBPF19A0A087WUL8 3843 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.76□□□□□ -1.49
USP3-215ENST00000559771 ANKRD62A6NC57 917 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 A6NCN8 305 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 HGSO14964 777 aaPredicted RBP5.76□□□□□ -1.49
USP3-215ENST00000559771 ARHGAP6O43182 974 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 CBFA2T2O43439 604 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 PRPSAP2O60256 369 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 DNAJC6O75061 913 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 SOCS5O75159 536 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 CPP00450 1065 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 PRLP01236 227 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 CD48P09326 243 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 RARAP10276 462 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 GZMAP12544 262 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 SKILP12757 684 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 LIFP15018 202 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 CTPS1P17812 591 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 KELP23276 732 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 UGT1A3P35503 534 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 PCK1P35558 622 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 PRKCIP41743 596 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 GPR3P46089 330 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 ARSEP51690 589 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 SLC25A11Q02978 314 aaKnown RBP5.76□□□□□ -1.49
USP3-215ENST00000559771 SRSF1Q07955 248 aaKnown RBP eCLIP5.76□□□□□ -1.49
USP3-215ENST00000559771 CLPPQ16740 277 aaPredicted RBP5.76□□□□□ -1.49
USP3-215ENST00000559771 SMTNL2Q2TAL5 461 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 MAP9Q49MG5 647 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 PYCR3Q53H96 274 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 MANEAQ5SRI9 462 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.76□□□□□ -1.49
USP3-215ENST00000559771 FAM182AQ5T1J6 154 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 HGSNATQ68CP4 663 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 DENND2CQ68D51 928 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 XKR5Q6UX68 686 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 TIPARPQ7Z3E1 657 aaKnown RBP5.76□□□□□ -1.49
USP3-215ENST00000559771 TRIM74Q86UV6 250 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 ZNF761Q86XN6 746 aaPredicted RBP5.76□□□□□ -1.49
USP3-215ENST00000559771 CPNE8Q86YQ8 564 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 LZTR1Q8N653 840 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 TEX26Q8N6G2 289 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 OR4D9Q8NGE8 314 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 FAM71BQ8TC56 605 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 SCAMP4Q969E2 229 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 EID2BQ96D98 161 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 COX14Q96I36 57 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 TAAR9Q96RI9 348 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 GSDMCQ9BYG8 508 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 ISCUQ9H1K1 167 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 PCDH18Q9HCL0 1135 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 PHPT1Q9NRX4 125 aaPredicted RBP5.76□□□□□ -1.49
USP3-215ENST00000559771 GEMIN8Q9NWZ8 242 aaKnown RBP5.76□□□□□ -1.49
USP3-215ENST00000559771 AIPL1Q9NZN9 384 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 CNOT8Q9UFF9 292 aaKnown RBP5.76□□□□□ -1.49
USP3-215ENST00000559771 CD84Q9UIB8 345 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 MOSPD1Q9UJG1 213 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 CNOT6Q9ULM6 557 aaKnown RBP5.76□□□□□ -1.49
USP3-215ENST00000559771 MYO6Q9UM54 1294 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 PHTF1Q9UMS5 762 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 TMEM98Q9Y2Y6 226 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 B3GALT1Q9Y5Z6 326 aa5.76□□□□□ -1.49
USP3-215ENST00000559771 ZNF106Q9H2Y7 1883 aaKnown RBP5.76□□□□□ -1.49
USP3-215ENST00000559771 TRBV23OR9-2A0A075B6M9 112 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 A0A1W2PQ67 120 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 CLEC18AA5D8T8 446 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 RHPN2P1A8MT19 583 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 STMND1H3BQB6 276 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 PSMD11O00231 422 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 PDE2AO00408 941 aaPredicted RBP5.75□□□□□ -1.49
USP3-215ENST00000559771 DAPK3O43293 454 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms