RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 HSP90AA5PQ58FG0 334 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 NCBP2-AS2Q69YL0 99 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 RWDD4Q6NW29 188 aaKnown RBP7.05□□□□□ -1.28
ZEB1-216ENST00000559496 B3GNT6Q6ZMB0 384 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 NEK10Q6ZWH5 1172 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 RTL10Q7L3V2 364 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 GSTA5Q7RTV2 222 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 PATL1Q86TB9 770 aaKnown RBP7.05□□□□□ -1.28
ZEB1-216ENST00000559496 TMEM150AQ86TG1 271 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 FAM124AQ86V42 546 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 TMC8Q8IU68 726 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 SPERTQ8NA61 448 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 TXNDC5Q8NBS9 432 aaKnown RBP7.05□□□□□ -1.28
ZEB1-216ENST00000559496 GDPD5Q8WTR4 605 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 SLC22A17Q8WUG5 538 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 UCMAQ8WVF2 138 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 CASKIN2Q8WXE0 1202 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 MRPS31Q92665 395 aaKnown RBP7.05□□□□□ -1.28
ZEB1-216ENST00000559496 TLCD1Q96CP7 247 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 DGCR14Q96DF8 476 aaKnown RBP7.05□□□□□ -1.28
ZEB1-216ENST00000559496 MPP4Q96JB8 637 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 BTN2A3PQ96KV6 586 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 NUDCD1Q96RS6 583 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 ERP44Q9BS26 406 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 TRIM31Q9BZY9 425 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 LMAN2LQ9H0V9 348 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 LRMDAQ9H2I8 198 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 DPH5Q9H2P9 285 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 SLC28A3Q9HAS3 691 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 TRPC7Q9HCX4 862 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 ASAH2Q9NR71 780 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 MKS1Q9NXB0 559 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 NKX1-2Q9UD57 310 aaPredicted RBP7.05□□□□□ -1.28
ZEB1-216ENST00000559496 ASIC3Q9UHC3 531 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 XPO7Q9UIA9 1087 aaKnown RBP7.05□□□□□ -1.28
ZEB1-216ENST00000559496 DRG1Q9Y295 367 aaKnown RBP7.05□□□□□ -1.28
ZEB1-216ENST00000559496 TSC22D4Q9Y3Q8 395 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 USP15Q9Y4E8 981 aaPredicted RBP7.05□□□□□ -1.28
ZEB1-216ENST00000559496 HS3ST4Q9Y661 456 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 NFS1Q9Y697 457 aa7.05□□□□□ -1.28
ZEB1-216ENST00000559496 ANAPC1Q9H1A4 1944 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 CEP290O15078 2479 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 A0A088AWK7 358 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 C2orf78A6NCI8 922 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 FAM25EA8MYX2 175 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 E9PAM4 449 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 K7ESM1 405 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 PER2O15055 1255 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 DCLK1O15075 740 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 KMOO15229 486 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 MFSD11O43934 449 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 SNX3O60493 162 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 RFPL2O75678 378 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 CYP7B1O75881 506 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 IFNB1P01574 187 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 LYNP07948 512 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 HNRNPA1P09651 372 aaKnown RBP eCLIP7.04□□□□□ -1.28
ZEB1-216ENST00000559496 SRGAP2BP0DMP2 458 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 RBP3P10745 1247 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 MBL2P11226 248 aaPredicted RBP7.04□□□□□ -1.28
ZEB1-216ENST00000559496 MYL4P12829 197 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 KRT4P19013 534 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 ENPP1P22413 925 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 HOXA9P31269 272 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 HARS2P49590 506 aaKnown RBP7.04□□□□□ -1.28
ZEB1-216ENST00000559496 VPS41P49754 854 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 KCNQ1P51787 676 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 MLLT6P55198 1093 aaPredicted RBP7.04□□□□□ -1.28
ZEB1-216ENST00000559496 COG7P83436 770 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 AP1B1Q10567 949 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 CUL1Q13616 776 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 HLTFQ14527 1009 aaKnown RBP eCLIP7.04□□□□□ -1.28
ZEB1-216ENST00000559496 PAFAH1B3Q15102 231 aaKnown RBP7.04□□□□□ -1.28
ZEB1-216ENST00000559496 TRIP13Q15645 432 aaPredicted RBP7.04□□□□□ -1.28
ZEB1-216ENST00000559496 MS4A13Q5J8X5 152 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 PIK3R6Q5UE93 754 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 MANEALQ5VSG8 457 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 DUPD1Q68J44 220 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 TXNDC8Q6A555 127 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 DARS2Q6PI48 645 aaKnown RBP7.04□□□□□ -1.28
ZEB1-216ENST00000559496 DBX2Q6ZNG2 339 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 GAREM2Q75VX8 874 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 PDZD4Q76G19 769 aaPredicted RBP7.04□□□□□ -1.28
ZEB1-216ENST00000559496 ADGRD2Q7Z7M1 963 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 RBM23Q86U06 439 aaKnown RBP7.04□□□□□ -1.28
ZEB1-216ENST00000559496 DDX42Q86XP3 938 aaKnown RBP eCLIP7.04□□□□□ -1.28
ZEB1-216ENST00000559496 GRAMD2AQ8IUY3 354 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 CDKL3Q8IVW4 592 aaPredicted RBP7.04□□□□□ -1.28
ZEB1-216ENST00000559496 UNC45BQ8IWX7 931 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 TDHQ8IZJ6 230 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 ALLCQ8N6M5 410 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 CCDC89Q8N998 374 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 LRRC8CQ8TDW0 803 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 ATXN2LQ8WWM7 1075 aaKnown RBP7.04□□□□□ -1.28
ZEB1-216ENST00000559496 GAB3Q8WWW8 586 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 RSAD2Q8WXG1 361 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 STARD8Q92502 1023 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 TIFAQ96CG3 184 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 C1orf74Q96LT6 269 aa7.04□□□□□ -1.28
ZEB1-216ENST00000559496 SRPK1Q96SB4 655 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms