RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 CENPUQ71F23 418 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 EFL1Q7Z2Z2 1120 aaKnown RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 CLNKQ7Z7G1 428 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 PHLDB2Q86SQ0 1253 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 SLC35F3Q8IY50 421 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 RCOR2Q8IZ40 523 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 PYROXD2Q8N2H3 581 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 KIF2BQ8N4N8 673 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 TP53I13Q8NBR0 393 aaPredicted RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 OR2AP1Q8NGE2 309 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 GDAP1Q8TB36 358 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 RAB3IL1Q8TBN0 382 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 FAM174AQ8TBP5 190 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 MAPK15Q8TD08 544 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 MGARPQ8TDB4 240 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 RXFP2Q8WXD0 754 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 UTP4Q969X6 686 aaKnown RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 FAM136AQ96C01 138 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 SLC7A6OSQ96CW6 309 aaPredicted RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 PPP1R16AQ96I34 528 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 FEM1CQ96JP0 617 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 KLHL32Q96NJ5 620 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 DEPDC7Q96QD5 511 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 RBM15Q96T37 977 aaKnown RBP eCLIP5.87□□□□□ -1.47
USP3-212ENST00000559276 LGMNQ99538 433 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 SIKE1Q9BRV8 207 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 LRRC61Q9BV99 259 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 DUSP23Q9BVJ7 150 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 TRIM55Q9BYV6 548 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 FRMD8Q9BZ67 464 aaPredicted RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 OSBPL8Q9BZF1 889 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 TRABDQ9H4I3 376 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 ZDHHC6Q9H6R6 413 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 USP29Q9HBJ7 922 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 PCDH9Q9HC56 1237 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 DYRK4Q9NR20 520 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 TMEM248Q9NWD8 314 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 STX18Q9P2W9 335 aaKnown RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 OR12D3Q9UGF7 316 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 RABGEF1Q9UJ41 708 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 ZFP69BQ9UJL9 534 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 ANAPC7Q9UJX3 599 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 FARP1Q9Y4F1 1045 aaPredicted RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 TCRBV7S2A1N4TA0A589 114 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 CPED1A4D0V7 1026 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 MAGEA13PA6NCF6 341 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 NEMP2A6NFY4 417 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 EIF4E1BA6NMX2 242 aaKnown RBP5.86□□□□□ -1.47
USP3-212ENST00000559276 LMO7DNF2Z398 122 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 NTN3O00634 580 aaPredicted RBP5.86□□□□□ -1.47
USP3-212ENST00000559276 FPGTO14772 594 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 YY2O15391 372 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 KLK10O43240 276 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 KDELR3O43731 214 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 TYROBPO43914 113 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 NOBOXO60393 691 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 MMP20O60882 483 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 SMIM24O75264 130 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 HAUS5O94927 633 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 UGT2B4P06133 528 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 ALPPL2P10696 532 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 KRT10P13645 584 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 TIMP2P16035 220 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 FOXN2P32314 431 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 RFC1P35251 1148 aaPredicted RBP5.86□□□□□ -1.47
USP3-212ENST00000559276 PTPN9P43378 593 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 RECQLP46063 649 aaPredicted RBP5.86□□□□□ -1.47
USP3-212ENST00000559276 MAPKAPK2P49137 400 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 DUSP3P51452 185 aaPredicted RBP5.86□□□□□ -1.47
USP3-212ENST00000559276 RAP1GDS1P52306 607 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 GEMIN4P57678 1058 aaKnown RBP5.86□□□□□ -1.47
USP3-212ENST00000559276 TMPRSS3P57727 454 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 XIAPP98170 497 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 SLC34A1Q06495 639 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 AP1B1Q10567 949 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 CLN3Q13286 438 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 LY6DQ14210 128 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 TMED2Q15363 201 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 CYTH1Q15438 398 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 CDO1Q16878 200 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 MYLK3Q32MK0 819 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 PRRT3Q5FWE3 981 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 C3orf38Q5JPI3 329 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 C6orf163Q5TEZ5 329 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 ARHGAP40Q5TG30 622 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 GDPD4Q6W3E5 623 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 NLRP9Q7RTR0 991 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 B3GNT8Q7Z7M8 397 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 ADGRG6Q86SQ4 1221 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 CLEC14AQ86T13 490 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 ZSWIM9Q86XI8 627 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 DNAAF5Q86Y56 855 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 PHF13Q86YI8 300 aaPredicted RBP5.86□□□□□ -1.47
USP3-212ENST00000559276 SFTPA2Q8IWL1 248 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 PHACTR4Q8IZ21 702 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 MCOLN2Q8IZK6 566 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 LSMEM2Q8N112 164 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 TTC13Q8NBP0 860 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 DENND6BQ8NEG7 585 aa5.86□□□□□ -1.47
USP3-212ENST00000559276 LMX1AQ8TE12 382 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms