RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 MC4RP32245 332 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 ACTR1BP42025 376 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 PTGIRP43119 386 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 FNTAP49354 379 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 ACTR1AP61163 376 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 B4GALNT1Q00973 533 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 ILF3Q12906 894 aaKnown RBP eCLIP18.48■□□□□ 0.55
CASC4-209ENST00000559222 NR0B2Q15466 257 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 HS1BP3Q53T59 392 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 ZDHHC20Q5W0Z9 365 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 KLHL7Q8IXQ5 586 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 ARL10Q8N8L6 244 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 RASGEF1AQ8N9B8 481 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 DDHD1Q8NEL9 900 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 GPR156Q8NFN8 814 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 OR13J1Q8NGT2 312 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 GDAP1Q8TB36 358 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 DTX3LQ8TDB6 740 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 LRRC45Q96CN5 670 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 SCNM1Q9BWG6 230 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 GSDMCQ9BYG8 508 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 DPEP2Q9H4A9 486 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 ASB8Q9H765 288 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 SMOXQ9NWM0 555 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 GOLGA6L10A0A0M3HER8 536 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 CHUKO15111 745 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 PPFIA2O75334 1257 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 AVILO75366 819 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 TPSB2P20231 275 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 MGAT1P26572 445 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 ETF1P62495 437 aaKnown RBP18.47■□□□□ 0.55
CASC4-209ENST00000559222 TMEM115Q12893 351 aaPredicted RBP18.47■□□□□ 0.55
CASC4-209ENST00000559222 NFATC2Q13469 925 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 TPSAB1Q15661 275 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 OGFOD3Q6PK18 319 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 LVRNQ6Q4G3 990 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 DET1Q7L5Y6 550 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 C11orf96Q7Z7L8 435 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 PIANPQ8IYJ0 282 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 MPP5Q8N3R9 675 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 TRIM56Q9BRZ2 755 aaKnown RBP18.47■□□□□ 0.55
CASC4-209ENST00000559222 SYBUQ9NX95 663 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 PADI4Q9UM07 663 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 TCAF1Q9Y4C2 921 aa18.47■□□□□ 0.55
CASC4-209ENST00000559222 CCDC162PA2VCL2 907 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 EME2A4GXA9 379 aaPredicted RBP18.46■□□□□ 0.55
CASC4-209ENST00000559222 SGTAO43765 313 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 CDK14O94921 469 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 PSMA3P25788 255 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 MAGEA6P43360 314 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 MRPS25P82663 173 aaKnown RBP18.46■□□□□ 0.55
CASC4-209ENST00000559222 INSM1Q01101 510 aaPredicted RBP18.46■□□□□ 0.55
CASC4-209ENST00000559222 ITGA9Q13797 1035 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 TSTD2Q5T7W7 516 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 C4orf22Q6V702 233 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 NAGSQ8N159 534 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 SDR16C5Q8N3Y7 309 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 ZDHHC1Q8WTX9 485 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 STYXQ8WUJ0 223 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 CCDC74AQ96AQ1 378 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 CDKN2AIPNLQ96HQ2 116 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 C16orf45Q96MC5 204 aaPredicted RBP18.46■□□□□ 0.55
CASC4-209ENST00000559222 RANBP9Q96S59 729 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 TRIM51Q9BSJ1 452 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 TBC1D29Q9UFV1 150 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 PCDHGA1Q9Y5H4 931 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 RNF215Q9Y6U7 377 aa18.46■□□□□ 0.55
CASC4-209ENST00000559222 TRBV23OR9-2A0A075B6M9 112 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 OR2AG2A6NM03 316 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 AGAP14A8MT82 685 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 GOLGA8MH3BSY2 632 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 H7C0S8 307 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 VEGFDO43915 354 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 ECEL1O95672 775 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 CASQ1P31415 396 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 PDE1BQ01064 536 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 HLTFQ14527 1009 aaKnown RBP eCLIP18.45■□□□□ 0.54
CASC4-209ENST00000559222 SMAD1Q15797 465 aaKnown RBP18.45■□□□□ 0.54
CASC4-209ENST00000559222 ZRANB3Q5FWF4 1079 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 HES3Q5TGS1 186 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 CES3Q6UWW8 571 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 XKR5Q6UX68 686 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 LRRTM4Q86VH4 590 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 CAND1Q86VP6 1230 aaKnown RBP18.45■□□□□ 0.54
CASC4-209ENST00000559222 AGGF1Q8N302 714 aaeCLIP18.45■□□□□ 0.546e-8■■■□□ 17.9
CASC4-209ENST00000559222 NXPE1Q8N323 547 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 BEND7Q8N7W2 519 aaPredicted RBP18.45■□□□□ 0.54
CASC4-209ENST00000559222 SCG3Q8WXD2 468 aaKnown RBP18.45■□□□□ 0.54
CASC4-209ENST00000559222 RMI1Q9H9A7 625 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 CHRAC1Q9NRG0 131 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 KLC4Q9NSK0 619 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 CRLS1Q9UJA2 301 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 APPL1Q9UKG1 709 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 DNAJC16Q9Y2G8 782 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 AKAP13Q12802 2813 aa18.45■□□□□ 0.54
CASC4-209ENST00000559222 EPG5Q9HCE0 2579 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 TRBV5-4A0A0C4DH59 114 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 HEATR9A2RTY3 570 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 A6NCN8 305 aa18.44■□□□□ 0.54
CASC4-209ENST00000559222 PRR19A6NJB7 356 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms