RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 POLR2EP19388 210 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 IGFBP5P24593 272 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 RHAGQ02094 409 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 SNAPC2Q13487 334 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 HNRNPDQ14103 355 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 RABL3Q5HYI8 236 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 HFE2Q6ZVN8 426 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 PEX5LQ8IYB4 626 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 TXNDC5Q8NBS9 432 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 OR4L1Q8NH43 312 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 LRRC58Q96CX6 371 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 CDK15Q96Q40 435 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 WDR83Q9BRX9 315 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 POLR1EQ9GZS1 481 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 XYLT2Q9H1B5 865 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 ING3Q9NXR8 418 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 SPASTQ9UBP0 616 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 TFECO14948 347 aaPredicted RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 SSNA1O43805 119 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 CYP2B6P20813 491 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 MAPK1P28482 360 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 SLC26A3P40879 764 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 SCNN1GP51170 649 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 ITGA1P56199 1179 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 VBP1P61758 197 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 COPZ1P61923 177 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 BTN3A2P78410 334 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 ZNF177Q13360 481 aaPredicted RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 ZNF829Q3KNS6 432 aaPredicted RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 C16orf59Q7L2K0 433 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 P2RY8Q86VZ1 359 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 TP53INP2Q8IXH6 220 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 LGI2Q8N0V4 545 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 SPPL2BQ8TCT7 592 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 GPR152Q8TDT2 470 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 MZB1Q8WU39 189 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 HDAC2Q92769 488 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 OR52E6Q96RD3 313 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 RBM4BQ9BQ04 359 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 RBM4Q9BWF3 364 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 ABCC13Q9NSE7 274 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 DNAJC11Q9NVH1 559 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 CNTN3Q9P232 1028 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 KIAA1551Q9HCM1 1747 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 ADAMTS7Q9UKP4 1686 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 GNG14A0A1W2PPG7 69 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 SOWAHBA6NEL2 793 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 ZNF99A8MXY4 864 aaPredicted RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 STMND1H3BQB6 276 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 H7C0S8 307 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 FBP2O00757 339 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 NOS1APO75052 506 aaPredicted RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 RSL1D1O76021 490 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 SNAP29O95721 258 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 ANGPTL1O95841 491 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 EDN1P05305 212 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 PMS2P3Q13401 168 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 DENND5AQ6IQ26 1287 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 AHSA2Q719I0 299 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 TMEM126BQ8IUX1 230 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 CCDC36Q8IYA8 594 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 LRRC52Q8N7C0 313 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 OR10A6Q8NH74 314 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 PNPT1Q8TCS8 783 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 TMBIM1Q969X1 311 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 SERPINB11Q96P15 392 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 TRMOQ9BU70 441 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 FZD8Q9H461 694 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 AGO3Q9H9G7 860 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 ZDHHC7Q9NXF8 308 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 OPTCQ9UBM4 332 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 ZNHIT2Q9UHR6 403 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 OGDHLQ9ULD0 1010 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 SAMHD1Q9Y3Z3 626 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 GPC6Q9Y625 555 aaPredicted RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 YJEFN3A6XGL0 299 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 RHOCP08134 193 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 THPOP40225 353 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 MAGEA10P43363 369 aaPredicted RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 MEP1AQ16819 746 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 USP39Q53GS9 565 aaKnown RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 TMEM236Q5W0B7 351 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 FIBCD1Q8N539 461 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 METTL25Q8N6Q8 603 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 VPS37AQ8NEZ2 397 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 DMRTB1Q96MA1 342 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 ZFP42Q96MM3 310 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 ZNF285Q96NJ3 590 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 GPR22Q99680 433 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 TBCCD1Q9NVR7 557 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 SMOXQ9NWM0 555 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 CACNG4Q9UBN1 327 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 PADI4Q9UM07 663 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 G3V2L1 256 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 GOT2P00505 430 aaKnown RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 SERPIND1P05546 499 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 GRIA2P42262 883 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 MAGEA2P43356 314 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 POLD2P49005 469 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms