RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 BEND7Q8N7W2 519 aaPredicted RBP10.78□□□□□ -0.68
TPM1-217ENST00000559108 MNS1Q8NEH6 495 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 STAMBPL1Q96FJ0 436 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 C19orf43Q9BQ61 176 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 RHOXF2Q9BQY4 288 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 CDH19Q9H159 772 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 OR2AG1Q9H205 316 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 EPB41L5Q9HCM4 733 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 CYP4F12Q9HCS2 524 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 TMEM9BQ9NQ34 198 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 RRAGDQ9NQL2 400 aaPredicted RBP10.78□□□□□ -0.68
TPM1-217ENST00000559108 KLQ9UEF7 1012 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 U3KQA8 63 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 PIEZO1Q92508 2521 aa10.78□□□□□ -0.68
TPM1-217ENST00000559108 TOR1BO14657 336 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 CHUKO15111 745 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 CASC3O15234 703 aaKnown RBP10.77□□□□□ -0.69
TPM1-217ENST00000559108 OR1I1O60431 355 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 PPFIA2O75334 1257 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 PIAS1O75925 651 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 SLC25A14O95258 325 aaPredicted RBP10.77□□□□□ -0.69
TPM1-217ENST00000559108 VAPBO95292 243 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 IVLP07476 585 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 SYPP08247 313 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 MYBL2P10244 700 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 JUNDP17535 347 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 DGKAP23743 735 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 AK4P27144 223 aaPredicted RBP10.77□□□□□ -0.69
TPM1-217ENST00000559108 HADHAP40939 763 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 CARSP49589 748 aaKnown RBP10.77□□□□□ -0.69
TPM1-217ENST00000559108 DRG2P55039 364 aaKnown RBP10.77□□□□□ -0.69
TPM1-217ENST00000559108 PDIA2Q13087 525 aaKnown RBP10.77□□□□□ -0.69
TPM1-217ENST00000559108 CRYMQ14894 314 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 HIF1AQ16665 826 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 UAP1L1Q3KQV9 507 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 PLA2G4EQ3MJ16 856 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 ZNF658BQ4V348 819 aaPredicted RBP10.77□□□□□ -0.69
TPM1-217ENST00000559108 PYCR3Q53H96 274 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 ZRANB3Q5FWF4 1079 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 STEAP4Q687X5 459 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 PDPK2PQ6A1A2 396 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 KIAA0930Q6ICG6 404 aaPredicted RBP10.77□□□□□ -0.69
TPM1-217ENST00000559108 CRTC3Q6UUV7 619 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 DBX2Q6ZNG2 339 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 DET1Q7L5Y6 550 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 SNX20Q7Z614 316 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 PCGF5Q86SE9 256 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 CLDN19Q8N6F1 224 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 FAM174AQ8TBP5 190 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 LKAAEAR1Q8TD35 194 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 EBNA1BP2Q99848 306 aaKnown RBP10.77□□□□□ -0.69
TPM1-217ENST00000559108 ZDHHC5Q9C0B5 715 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 RAB17Q9H0T7 212 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 CARS2Q9HA77 564 aaKnown RBP10.77□□□□□ -0.69
TPM1-217ENST00000559108 TRIM39Q9HCM9 518 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 SMYD2Q9NRG4 433 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 RAD18Q9NS91 495 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 KCTD5Q9NXV2 234 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 APOBEC3BQ9UH17 382 aaKnown RBP10.77□□□□□ -0.69
TPM1-217ENST00000559108 UTP11Q9Y3A2 253 aaKnown RBP10.77□□□□□ -0.69
TPM1-217ENST00000559108 MAD1L1Q9Y6D9 718 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 RPS6KL1Q9Y6S9 549 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 DGKBQ9Y6T7 804 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 CFAP54Q96N23 3096 aa10.77□□□□□ -0.69
TPM1-217ENST00000559108 PTPRZ1P23471 2315 aaPredicted RBP10.76□□□□□ -0.69
TPM1-217ENST00000559108 TNFRSF10CO14798 259 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 NUAK1O60285 661 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 RASGRP1O95267 797 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 ASMTLO95671 621 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 CER1O95813 267 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 PYGLP06737 847 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 ITGALP20701 1170 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 ACRV1P26436 265 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 CCT8P50990 548 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 PDE1BQ01064 536 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 PPARDQ03181 441 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 CACNG1Q06432 222 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 TMEM115Q12893 351 aaPredicted RBP10.76□□□□□ -0.69
TPM1-217ENST00000559108 PTK2BQ14289 1009 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 SKIDA1Q1XH10 827 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 PRRT3Q5FWE3 981 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 DNTTIP2Q5QJE6 756 aaKnown RBP10.76□□□□□ -0.69
TPM1-217ENST00000559108 CASC4Q6P4E1 433 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 FAM83HQ6ZRV2 1179 aaPredicted RBP10.76□□□□□ -0.69
TPM1-217ENST00000559108 CENPUQ71F23 418 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 PIP4P1Q86T03 277 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 DCP2Q8IU60 420 aaKnown RBP10.76□□□□□ -0.69
TPM1-217ENST00000559108 PHYKPLQ8IUZ5 450 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 DENND6AQ8IWF6 608 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 LILRA3Q8N6C8 439 aaPredicted RBP10.76□□□□□ -0.69
TPM1-217ENST00000559108 FBXO36Q8NEA4 188 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 OR6P1Q8NGX9 317 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 OR4L1Q8NH43 312 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 BAHD1Q8TBE0 780 aaPredicted RBP10.76□□□□□ -0.69
TPM1-217ENST00000559108 LMX1AQ8TE12 382 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 PATE1Q8WXA2 126 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 PEX13Q92968 403 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 SGF29Q96ES7 293 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 CFAP36Q96G28 342 aa10.76□□□□□ -0.69
TPM1-217ENST00000559108 ANKZF1Q9H8Y5 726 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms