RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 GPSM1Q86YR5 675 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 TUSC5Q8IXB3 177 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 SYCP3Q8IZU3 236 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 GALNT16Q8N428 558 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 RASGEF1CQ8N431 466 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 TMEM199Q8N511 208 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 EMC1Q8N766 993 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 BOLLQ8N9W6 283 aaKnown RBP2.29□□□□□ -2.04
GABPB1-209ENST00000559100 WDR20Q8TBZ3 569 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 ZFAND2BQ8WV99 257 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 TRIB2Q92519 343 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 LPAR1Q92633 364 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 KRT35Q92764 455 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 GRAMD2BQ96HH9 432 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 APOLD1Q96LR9 279 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 MS4A10Q96PG2 267 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 SIGLEC11Q96RL6 698 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 SEPHS2Q99611 448 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 SH3GL2Q99962 352 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 MSTO1Q9BUK6 570 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 ZNF747Q9BV97 191 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 ACAT2Q9BWD1 397 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 GPR88Q9GZN0 384 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 TMEM39BQ9GZU3 492 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 KLHL31Q9H511 634 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 ESRP2Q9H6T0 727 aaKnown RBP2.29□□□□□ -2.04
GABPB1-209ENST00000559100 CATSPERBQ9H7T0 1116 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 ANKZF1Q9H8Y5 726 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 TBC1D17Q9HA65 648 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 SEBOXQ9HB31 216 aaPredicted RBP2.29□□□□□ -2.04
GABPB1-209ENST00000559100 MKKSQ9NPJ1 570 aaPredicted RBP2.29□□□□□ -2.04
GABPB1-209ENST00000559100 CNGB3Q9NQW8 809 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 SEMA4GQ9NTN9 838 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 ABCB8Q9NUT2 735 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 OLAHQ9NV23 265 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 DPP3Q9NY33 737 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 OR6C3Q9NZP0 311 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 MSRB1Q9NZV6 116 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 UBA2Q9UBT2 640 aaPredicted RBP2.29□□□□□ -2.04
GABPB1-209ENST00000559100 IL17BQ9UHF5 180 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 ZNHIT2Q9UHR6 403 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 B3GALT5Q9Y2C3 310 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 KCNK7Q9Y2U2 307 aa2.29□□□□□ -2.04
GABPB1-209ENST00000559100 GTPBP10A4D1E9 387 aaKnown RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 A4D1N5 150 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 LRRC3CA6NJW4 275 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 ANXA2P2A6NMY6 339 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 B4DGG1 531 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 PI4K2BG5E9Z4 385 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 MS4A18H0YCH9 400 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 DDX39AO00148 427 aaKnown RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 PPP6CO00743 305 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 ADAM10O14672 748 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 ZNF263O14978 683 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 MDM4O15151 490 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 FOXN1O15353 648 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 NDUFS4O43181 175 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 SPINT2O43291 252 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 SSX4O60224 188 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 FMO6PO60774 539 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 KERAO60938 352 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 MOCS3O95396 460 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 IGLV2-14P01704 120 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 CYP1A2P05177 515 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 PTMAP06454 111 aaKnown RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 VIMP08670 466 aaKnown RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 LINGO3P0C6S8 592 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 CTSAP10619 480 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 SRCP12931 536 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 DDX5P17844 614 aaKnown RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 HLA-DPA1P20036 260 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 MAOAP21397 527 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 NR2F2P24468 414 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 CERS1P27544 350 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 TCF7P36402 384 aaPredicted RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 RPL3P39023 403 aaKnown RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 MTHFRP42898 656 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 ST3GAL1Q11201 340 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 SLC10A2Q12908 348 aaPredicted RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 FOXF2Q12947 444 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 PTPRCAPQ14761 206 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 TAZQ16635 292 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 MYLK3Q32MK0 819 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 KCNT1Q5JUK3 1230 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 CCDC158Q5M9N0 1113 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 SLC10A5Q5PT55 438 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 WASHC2DQ5SRD0 308 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 MEX3CQ5U5Q3 659 aaKnown RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 STRIP1Q5VSL9 837 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 DCAF12L2Q5VW00 463 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 NSUN5P2Q63ZY6 315 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 PLEKHA7Q6IQ23 1121 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 Q6ZTK2 550 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 SPATA19Q7Z5L4 167 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 UBE2Q1Q7Z7E8 422 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 MRGPRGQ86SM5 289 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 GLRX5Q86SX6 157 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 GPR180Q86V85 440 aa2.28□□□□□ -2.04
GABPB1-209ENST00000559100 ZC3HC1Q86WB0 502 aaKnown RBP2.28□□□□□ -2.04
GABPB1-209ENST00000559100 NDUFAF2Q8N183 169 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms