RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 RFLNAQ6ZTI6 216 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 RPS27LQ71UM5 84 aaKnown RBP12.84□□□□□ -0.35
SMAD3-207ENST00000558763 KDM1BQ8NB78 822 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 RHEBL1Q8TAI7 183 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 BOCQ9BWV1 1114 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 GSTO2Q9H4Y5 243 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 COG4Q9H9E3 785 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 CYP4F12Q9HCS2 524 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 LNPEPQ9UIQ6 1025 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 A0A0C4DFX4 3053 aa12.84□□□□□ -0.35
SMAD3-207ENST00000558763 CFAP73A6NFT4 308 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 PRRT4C9JH25 899 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 SPECC1L-ADORA2AF8WAN1 911 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 ESR1P03372 595 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 NQO1P15559 274 aaKnown RBP12.83□□□□□ -0.35
SMAD3-207ENST00000558763 RPS3P23396 243 aaKnown RBP eCLIP12.83□□□□□ -0.35
SMAD3-207ENST00000558763 CTHP32929 405 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 ZBTB16Q05516 673 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 PRKAA1Q13131 559 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 CHRNA6Q15825 494 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 SLC9B1Q4ZJI4 515 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 FBXW10Q5XX13 1052 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 SNX20Q7Z614 316 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 SERPINA9Q86WD7 417 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 PHTF2Q8N3S3 785 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 TERB1Q8NA31 727 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 SIDT2Q8NBJ9 832 aaKnown RBP12.83□□□□□ -0.35
SMAD3-207ENST00000558763 AGR3Q8TD06 166 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 NAT14Q8WUY8 206 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 DNASE1L2Q92874 299 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 KIAA1191Q96A73 305 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 KLHL29Q96CT2 875 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 L3HYPDHQ96EM0 354 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 ILKAPQ9H0C8 392 aaPredicted RBP12.83□□□□□ -0.35
SMAD3-207ENST00000558763 TFB2MQ9H5Q4 396 aaKnown RBP12.83□□□□□ -0.35
SMAD3-207ENST00000558763 FBRSL1Q9HCM7 1045 aaKnown RBP12.83□□□□□ -0.35
SMAD3-207ENST00000558763 NCKIPSDQ9NZQ3 722 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 B4GALT6Q9UBX8 382 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 SLC30A1Q9Y6M5 507 aa12.83□□□□□ -0.35
SMAD3-207ENST00000558763 MUC3AQ02505 3323 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 LRRK1Q38SD2 2015 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 GLYATL1P3A0A0U1RQE8 302 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 TBC1D3BA6NDS4 549 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 IQCF5A8MTL0 148 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 TMEM233B4DJY2 109 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 PRMT5O14744 637 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-207ENST00000558763 ATP5HO75947 161 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 KAT7O95251 611 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 KRT16P08779 473 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 UGT1A6P19224 532 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 UGT1A1P22309 533 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 UGT1A4P22310 534 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 UGT1A3P35503 534 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 UGT1A5P35504 534 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 SERPINB5P36952 375 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 SPAM1P38567 509 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 RPL14P50914 215 aaKnown RBP12.83□□□□□ -0.36
SMAD3-207ENST00000558763 FAM219BQ5XKK7 198 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 GDPD4Q6W3E5 623 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 CERS6Q6ZMG9 384 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 FRMD7Q6ZUT3 714 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 USP45Q70EL2 814 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 TAS2R42Q7RTR8 314 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 STK40Q8N2I9 435 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 CCNYL1Q8N7R7 359 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 LKAAEAR1Q8TD35 194 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 STON2Q8WXE9 905 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 INPP5DQ92835 1189 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 CCDC126Q96EE4 140 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 KLHL32Q96NJ5 620 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 ASB2Q96Q27 587 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 MIPEPQ99797 713 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 SHCBP1LQ9BZQ2 653 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 CCDC68Q9H2F9 335 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 ASB8Q9H765 288 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 TRPV5Q9NQA5 729 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 APPL1Q9UKG1 709 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 COMMD10Q9Y6G5 202 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 PRSS21Q9Y6M0 314 aa12.83□□□□□ -0.36
SMAD3-207ENST00000558763 ANTXRLA6NF34 631 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 UBXN8O00124 270 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 UBFD1O14562 309 aaKnown RBP12.82□□□□□ -0.36
SMAD3-207ENST00000558763 KERAO60938 352 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 LEFTY1O75610 366 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 SRPRAP08240 638 aaKnown RBP12.82□□□□□ -0.36
SMAD3-207ENST00000558763 HNRNPLP14866 589 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMAD3-207ENST00000558763 ACRV1P26436 265 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 EIF2DP41214 584 aaKnown RBP12.82□□□□□ -0.36
SMAD3-207ENST00000558763 ASPHQ12797 758 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 UBAP2LQ14157 1087 aaKnown RBP12.82□□□□□ -0.36
SMAD3-207ENST00000558763 ZNF678Q5SXM1 525 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 SLC22A9Q8IVM8 553 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 WFIKKN2Q8TEU8 576 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 PHF21BQ96EK2 531 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 OR52B2Q96RD2 323 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 P2RY13Q9BPV8 354 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 HEPHQ9BQS7 1158 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 OSBPL1AQ9BXW6 950 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 SYTL2Q9HCH5 934 aa12.82□□□□□ -0.36
SMAD3-207ENST00000558763 ZDHHC4Q9NPG8 344 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms