RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 MDFIQ99750 246 aa11.67□□□□□ -0.54
SMAD3-206ENST00000558739 SLX1AQ9BQ83 275 aa11.67□□□□□ -0.54
SMAD3-206ENST00000558739 LRRC19Q9H756 370 aa11.67□□□□□ -0.54
SMAD3-206ENST00000558739 WASH6PQ9NQA3 447 aa11.67□□□□□ -0.54
SMAD3-206ENST00000558739 ZNF624Q9P2J8 865 aaPredicted RBP11.67□□□□□ -0.54
SMAD3-206ENST00000558739 SIK3Q9Y2K2 1263 aa11.67□□□□□ -0.54
SMAD3-206ENST00000558739 ANKRD12Q6UB98 2062 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 PALMO75781 387 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 F13A1P00488 732 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 CD99P14209 185 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 CD1EP15812 388 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 CD44P16070 742 aaKnown RBP11.66□□□□□ -0.54
SMAD3-206ENST00000558739 SLC9A1P19634 815 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 SCNN1AP37088 669 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 SLC19A1P41440 591 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 CSNK1DP48730 415 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 POLR2LP62875 67 aaKnown RBP11.66□□□□□ -0.54
SMAD3-206ENST00000558739 SRSF11Q05519 484 aaKnown RBP11.66□□□□□ -0.54
SMAD3-206ENST00000558739 DPTQ07507 201 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 TRAF2Q12933 501 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 ABRQ12979 859 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 GPR18Q14330 331 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 PLEKHS1Q5SXH7 462 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 UMODL1-AS1Q8N2C9 162 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 GALNT16Q8N428 558 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 SIDT2Q8NBJ9 832 aaKnown RBP11.66□□□□□ -0.54
SMAD3-206ENST00000558739 JOSD2Q8TAC2 188 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 RXFP2Q8WXD0 754 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 RELTQ969Z4 430 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 ZNF514Q96K75 400 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-206ENST00000558739 CINPQ9BW66 212 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-206ENST00000558739 OSGEPL1Q9H4B0 414 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 RETREG1Q9H6L5 497 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 ARFGAP3Q9NP61 516 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 CHST11Q9NPF2 352 aa11.66□□□□□ -0.54
SMAD3-206ENST00000558739 CNOT6Q9ULM6 557 aaKnown RBP11.66□□□□□ -0.54
SMAD3-206ENST00000558739 INTS1Q8N201 2190 aaKnown RBP11.65□□□□□ -0.54
SMAD3-206ENST00000558739 OR52A4PA6NMU1 304 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 HTRA2O43464 458 aaPredicted RBP11.65□□□□□ -0.54
SMAD3-206ENST00000558739 CREB3O43889 395 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 LCA5LO95447 670 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 CPP00450 1065 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 ALPPP05187 535 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 CDH5P33151 784 aaPredicted RBP11.65□□□□□ -0.54
SMAD3-206ENST00000558739 KIR3DL1P43629 444 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 RRADP55042 308 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 YBEYP58557 167 aaPredicted RBP11.65□□□□□ -0.54
SMAD3-206ENST00000558739 PDE1BQ01064 536 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 PTCHD3Q3KNS1 767 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 PLA2G4EQ3MJ16 856 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 DCAF10Q5QP82 559 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 ZNF648Q5T619 568 aaPredicted RBP11.65□□□□□ -0.54
SMAD3-206ENST00000558739 ZNF658Q5TYW1 1059 aaPredicted RBP11.65□□□□□ -0.54
SMAD3-206ENST00000558739 TAF3Q5VWG9 929 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 LRRC66Q68CR7 880 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 ZADH2Q8N4Q0 377 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 WDR77Q9BQA1 342 aaPredicted RBP11.65□□□□□ -0.54
SMAD3-206ENST00000558739 RIOK2Q9BVS4 552 aaKnown RBP11.65□□□□□ -0.54
SMAD3-206ENST00000558739 NLNQ9BYT8 704 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 SLC39A8Q9C0K1 460 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 UCK1Q9HA47 277 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 SH3BGRL2Q9UJC5 107 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 NUP210LQ5VU65 1888 aa11.65□□□□□ -0.54
SMAD3-206ENST00000558739 FAM237AA0A1B0GTK4 181 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 CCDC78A2IDD5 438 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 BHMG1C9JSJ3 638 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-206ENST00000558739 ATMINO43313 823 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-206ENST00000558739 ALOX12BO75342 701 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 VIPP01282 170 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 ATXN8OSP0DMR3 200 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 ZSCAN22P10073 491 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-206ENST00000558739 BRAFP15056 766 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 RORAP35398 523 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 PAPOLAP51003 745 aaKnown RBP11.64□□□□□ -0.55
SMAD3-206ENST00000558739 TDGF1P3P51864 188 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 SNX16P57768 344 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 TLE4Q04727 773 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 Q0VFX4 171 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 COBLL1Q53SF7 1204 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 TTI2Q6NXR4 508 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 ENOSF1Q7L5Y1 443 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 DSELQ8IZU8 1212 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 ZNF808Q8N4W9 903 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-206ENST00000558739 FAM172AQ8WUF8 416 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 CPA5Q8WXQ8 436 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 SPOCK2Q92563 424 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 ZNF501Q96CX3 271 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-206ENST00000558739 PPM1MQ96MI6 270 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 CEP63Q96MT8 703 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 MCCC1Q96RQ3 725 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-206ENST00000558739 MAP3K3Q99759 626 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 SEMA3GQ9NS98 782 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 KLC4Q9NSK0 619 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 SEMA5BQ9P283 1151 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 APEX2Q9UBZ4 518 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 SLC23A2Q9UGH3 650 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 PCDHGB6Q9Y5F9 930 aa11.64□□□□□ -0.55
SMAD3-206ENST00000558739 A0A1W2PQJ5 194 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 TMEM200CA6NKL6 621 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 C2CD4BA6NLJ0 364 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms