RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 CRLS1Q9UJA2 301 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 NEU2Q9Y3R4 380 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 PCDHGA1Q9Y5H4 931 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 PCYT1BQ9Y5K3 369 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-205ENST00000558428 SLC30A1Q9Y6M5 507 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 U3KQA8 63 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 PTPRBP23467 1997 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 UNC13CQ8NB66 2214 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 CPED1A4D0V7 1026 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 B4DGG1 531 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 H7C0S8 307 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 AP3B1O00203 1094 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 ACP5P13686 325 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 ITGALP20701 1170 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 ADRA1DP25100 572 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 AKT1P31749 480 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 MAGEA6P43360 314 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 RPIAP49247 311 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 SARNPP82979 210 aaKnown RBP12.21□□□□□ -0.45
SMAD3-205ENST00000558428 TMEM115Q12893 351 aaPredicted RBP12.21□□□□□ -0.45
SMAD3-205ENST00000558428 LRP8Q14114 963 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 SKIDA1Q1XH10 827 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 ZRANB3Q5FWF4 1079 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 GPRC6AQ5T6X5 926 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 TSTD2Q5T7W7 516 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 ANKRD22Q5VYY1 191 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 CRTC3Q6UUV7 619 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 SNX20Q7Z614 316 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 LRRTM4Q86VH4 590 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 KYQ8NBH2 561 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 DDHD1Q8NEL9 900 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 PPHLN1Q8NEY8 458 aaKnown RBP12.21□□□□□ -0.45
SMAD3-205ENST00000558428 CPT1BQ92523 772 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 ULK4Q96C45 1275 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 CDKN2AIPNLQ96HQ2 116 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 RUNDC3BQ96NL0 473 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 ZCCHC2Q9C0B9 1178 aaKnown RBP12.21□□□□□ -0.45
SMAD3-205ENST00000558428 FAM96AQ9H5X1 160 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 SPATS2LQ9NUQ6 558 aaKnown RBP12.21□□□□□ -0.45
SMAD3-205ENST00000558428 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.21□□□□□ -0.45
SMAD3-205ENST00000558428 BFARQ9NZS9 450 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 ASIC3Q9UHC3 531 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 PCYOX1Q9UHG3 505 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 KCNK6Q9Y257 313 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 TCAF1Q9Y4C2 921 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 ST14Q9Y5Y6 855 aa12.21□□□□□ -0.45
SMAD3-205ENST00000558428 EME2A4GXA9 379 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-205ENST00000558428 CCDC188H7C350 402 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 CHUKO15111 745 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 KMOO15229 486 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 HYAL3O43820 417 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-205ENST00000558428 TMEM63AO94886 807 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 DKK1O94907 266 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 MSH3P20585 1137 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 PMLP29590 882 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 NPY2RP49146 381 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 ARSDP51689 593 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 CRADDP78560 199 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 ILKQ13418 452 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 PTK6Q13882 451 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 INSCQ1MX18 579 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 PLA2G4EQ3MJ16 856 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 PCID2Q5JVF3 399 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 GUSBP11Q6P575 273 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 LRRC8BQ6P9F7 803 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 DHRS13Q6UX07 377 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 MICALCLQ6ZW33 695 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 ZNF534Q76KX8 674 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 NLRP9Q7RTR0 991 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 EFL1Q7Z2Z2 1120 aaKnown RBP12.2□□□□□ -0.46
SMAD3-205ENST00000558428 TRAPPC5Q8IUR0 188 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 CHCHD4Q8N4Q1 142 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 IFI44Q8TCB0 444 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 ZDHHC1Q8WTX9 485 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 ADAMTS14Q8WXS8 1223 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 SLCO2A1Q92959 643 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 IL22Q9GZX6 179 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 SLC2A6Q9UGQ3 507 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 RIMKLBQ9ULI2 386 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 PADI4Q9UM07 663 aa12.2□□□□□ -0.46
SMAD3-205ENST00000558428 AGAP14A8MT82 685 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 GOLGA8MH3BSY2 632 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 NOBOXO60393 691 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 TOP3BO95985 862 aaKnown RBP12.19□□□□□ -0.46
SMAD3-205ENST00000558428 GP1BAP07359 652 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 CDK4P11802 303 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 PSMA3P25788 255 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 MGAT1P26572 445 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 PTGIRP43119 386 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 CDKN1CP49918 316 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-205ENST00000558428 FOXK2Q01167 660 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 DR1Q01658 176 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 CACNG1Q06432 222 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 GPR33Q49SQ1 333 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 OGFOD3Q6PK18 319 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 TMEM220Q6QAJ8 160 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 SYDE1Q6ZW31 735 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-205ENST00000558428 DET1Q7L5Y6 550 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 TAS2R42Q7RTR8 314 aa12.19□□□□□ -0.46
SMAD3-205ENST00000558428 RAB44Q7Z6P3 723 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms