RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 RPL3P39023 403 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 GP5P40197 560 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ASMTP46597 345 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 GLUD2P49448 558 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 GALCP54803 685 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 HERV-K104P61576 105 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SLC25A3Q00325 362 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 POU3F1Q03052 451 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 COL10A1Q03692 680 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 PRAMEF17Q5VTA0 474 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 C11orf63Q6NUN7 778 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 FAM198BQ6UWH4 519 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 LINGO4Q6UY18 593 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 MIER3Q7Z3K6 550 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ABI3BPQ7Z7G0 1075 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ANKRD13BQ86YJ7 626 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 AFAP1Q8N556 730 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 NEU4Q8WWR8 484 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZNF622Q969S3 477 aaKnown RBP eCLIP1.35□□□□□ -2.195e-7■■□□□ 14.3
CTDSPL2-202ENST00000558373 SCRN2Q96FV2 425 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 CCDC114Q96M63 670 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 NAA11Q9BSU3 229 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 UTP14AQ9BVJ6 771 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 MXD3Q9BW11 206 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TEX101Q9BY14 249 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 USP44Q9H0E7 712 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 RAD21L1Q9H4I0 556 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZCCHC17Q9NP64 241 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 POT1Q9NUX5 634 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TMEM161AQ9NX61 479 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TRPC4Q9UBN4 977 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 KLHL20Q9Y2M5 609 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 AMDHD2Q9Y303 409 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 KIF3AQ9Y496 699 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 LSM4Q9Y4Z0 139 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 PCDHAC2Q9Y5I4 1007 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 MAGED1Q9Y5V3 778 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 EPN1Q9Y6I3 576 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 COX11Q9Y6N1 276 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SMARCA4P51532 1647 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 FLT1P17948 1338 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 COL3A1P02461 1466 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 EDDM13A0A1B0GTR0 161 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 RPS10-NUDT3A0A1W2PQS6 291 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 LNP1A1A4G5 178 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ARHGEF37A1IGU5 675 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 CPED1A4D0V7 1026 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 NPIPB11E5RHQ5 1161 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SLCO1B7G3V0H7 640 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TLX3O43711 291 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 AHCYL1O43865 530 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 RNASEH1O60930 286 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 BCAR3O75815 825 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TPPPO94811 219 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 OAZ2O95190 189 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 KAT7O95251 611 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ATP5BP06576 529 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZNF18P17022 549 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TACR2P21452 398 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TYK2P29597 1187 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 HSPA4P34932 840 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TNNT3P45378 269 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 PMS2P54278 862 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SORDQ00796 357 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 PPIGQ13427 754 aaKnown RBP eCLIP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 GRAPQ13588 217 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 KPNB1Q14974 876 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 MIDNQ504T8 468 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 CCDC92Q53HC0 331 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZNF805Q5CZA5 627 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 BMP2KLQ5H9B9 411 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 C1orf141Q5JVX7 400 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SHEQ5VZ18 495 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 PRR27Q6MZM9 219 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ENPP7Q6UWV6 458 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 KIAA1324Q6UXG2 1013 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SPATA21Q7Z572 469 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 GALNT13Q8IUC8 556 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZBTB2Q8N680 514 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 HUS1BQ8NHY5 278 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SH3RF3Q8TEJ3 882 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 C2CD4CQ8TF44 421 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 MOB3AQ96BX8 217 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 MTERF3Q96E29 417 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 HES6Q96HZ4 224 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 CEP295NLQ96MC4 621 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZNF347Q96SE7 839 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SEMA3CQ99985 751 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 HDHD5Q9BXW7 423 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 MMRN2Q9H8L6 949 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 CYSLTR2Q9NS75 346 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 RCC2Q9P258 522 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 CHKBQ9Y259 395 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 WBP11Q9Y2W2 641 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 CFAP65Q6ZU64 1925 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 ADGRF5Q8IZF2 1346 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TRBV2A0A0J9YWF9 115 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 TCRBV5S1A1TA0A578 114 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 STMND1H3BQB6 276 aa1.35□□□□□ -2.19
CTDSPL2-202ENST00000558373 SLC33A1O00400 549 aaPredicted RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms