RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 C17orf75Q9HAS0 396 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 IFT46Q9NQC8 304 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 VPS9D1Q9Y2B5 631 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 PCDHGB5Q9Y5G0 923 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 A0A1B0GVC2 190 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF705GA8MUZ8 300 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 POLR1CO15160 346 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 AKR7A2O43488 359 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 REM1O75628 298 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 BDNFP23560 247 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 ADAM15Q13444 863 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 TMEM132DQ14C87 1099 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 TSTQ16762 297 aaKnown RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 CHMP1BQ7LBR1 199 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 PEG10Q86TG7 708 aaKnown RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 GDPD1Q8N9F7 314 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 IKZF4Q9H2S9 585 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 ARHGAP28Q9P2N2 729 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 IKZF3Q9UKT9 509 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 PRR12Q9ULL5 1215 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 ELOVL7A1L3X0 281 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 ALDH9A1P49189 494 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 HNMTP50135 292 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 MSS51Q4VC12 460 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 PAN3Q58A45 887 aaKnown RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 NSUN4Q96CB9 384 aaKnown RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF358Q9NW07 568 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 LRFN2Q9ULH4 789 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 CPQQ9Y646 472 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 OR10H3O60404 316 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 SLC22A5O76082 557 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 JUPP14923 745 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FSHRP23945 695 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CTSKP43235 329 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 MAGEA3P43357 314 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CEACAM7Q14002 265 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 HES5Q5TA89 166 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 LNX2Q8N448 690 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CIDECQ96AQ7 238 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 RNF19AQ9NV58 838 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 MAP4K5Q9Y4K4 846 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF14P17017 642 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 HAGHLQ6PII5 290 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TMBIM1Q969X1 311 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ELL3Q9HB65 397 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 HSFX1Q9UBD0 423 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CARMIL2Q6F5E8 1435 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 AQP12BA6NM10 295 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 IL7P13232 177 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 HOXB6P17509 224 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ERP29P30040 261 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TBC1D19Q8N5T2 526 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 COL21A1Q96P44 957 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 LHPPQ9H008 270 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ERVK-5Q9HDB9 667 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 PRDM5Q9NQX1 630 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FXYD6-FXYD2A0A087WZ82 144 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 A6NIN4 97 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CCNB2O95067 398 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 EDEM1Q92611 657 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 PIGKQ92643 395 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FXYD6Q9H0Q3 95 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 MRPL15Q9P015 296 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ST3GAL5Q9UNP4 418 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ABCA7Q8IZY2 2146 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 LSM8O95777 96 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 AOC1P19801 751 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ICAM3P32942 547 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 GPC1P35052 558 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CASP9P55211 416 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 MAZP56270 477 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CUZD1Q86UP6 607 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 POGLUT1Q8NBL1 392 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 PPP1R2P1Q96PQ5 205 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 OR6C2Q9NZP2 312 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TIMM13Q9Y5L4 95 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FGD6Q6ZV73 1430 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 SPATA31C1P0DKV0 1188 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 LRP8Q14114 963 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 HSDL1Q3SXM5 330 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FOXRED2Q8IWF2 684 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TMEM192Q8IY95 271 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CPXM1Q96SM3 734 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 SORBS1Q9BX66 1292 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 PCDHGA6Q9Y5G7 932 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 hCG_2039718K7EN88 272 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 AKAP8O43823 692 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 IL18RAPO95256 599 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 APOC1P02654 83 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 STSP08842 583 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 RORAP35398 523 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 MARSP56192 900 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 SSX2Q16385 188 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 SLC9B1Q4ZJI4 515 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 PNCKQ6P2M8 343 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 LRRC55Q6ZSA7 311 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 OR4C6Q8NH72 309 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TMEM209Q96SK2 561 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 COPS8Q99627 209 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CST11Q9H112 138 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms