RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 LPOP22079 712 aaPredicted RBP13.4□□□□□ -0.26
ALPK3-202ENST00000558077 PSMA3P25788 255 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 STIP1P31948 543 aaKnown RBP13.4□□□□□ -0.26
ALPK3-202ENST00000558077 CLCNKAP51800 687 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 ZNF140P52738 457 aaPredicted RBP13.4□□□□□ -0.26
ALPK3-202ENST00000558077 P3H1Q32P28 736 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 DRICH1Q6PGQ1 229 aaPredicted RBP13.4□□□□□ -0.26
ALPK3-202ENST00000558077 FAM151BQ6UXP7 276 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 RBM44Q6ZP01 1051 aaKnown RBP13.4□□□□□ -0.26
ALPK3-202ENST00000558077 ARHGEF18Q6ZSZ5 1173 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 CHST15Q7LFX5 561 aaPredicted RBP13.4□□□□□ -0.26
ALPK3-202ENST00000558077 B3GNT8Q7Z7M8 397 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 TRIM58Q8NG06 486 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 OR4K2Q8NGD2 314 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 OR13C4Q8NGS5 318 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 WDR48Q8TAF3 677 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 BRSK1Q8TDC3 778 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 ATXN7L3BQ96GX2 97 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 PDLIM2Q96JY6 352 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 ALS2CR12Q96Q35 445 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 FRMD8P1Q9BZ68 369 aaPredicted RBP13.4□□□□□ -0.26
ALPK3-202ENST00000558077 FKBPLQ9UIM3 349 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 KCNK6Q9Y257 313 aa13.4□□□□□ -0.26
ALPK3-202ENST00000558077 CELSR3Q9NYQ7 3312 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 GLYATL1P3A0A0U1RQE8 302 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 GPR89AB7ZAQ6 455 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 STX7O15400 261 aaKnown RBP13.39□□□□□ -0.27
ALPK3-202ENST00000558077 PPFIA2O75334 1257 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 AP2A1O95782 977 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 RPLP0P05388 317 aaKnown RBP13.39□□□□□ -0.27
ALPK3-202ENST00000558077 PTMAP06454 111 aaKnown RBP13.39□□□□□ -0.27
ALPK3-202ENST00000558077 GPR89BP0CG08 455 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 ACP5P13686 325 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 TPH1P17752 444 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 CTSCP53634 463 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 OR1D5P58170 312 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 CFHR1Q03591 330 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 ZFP36L1Q07352 338 aaKnown RBP13.39□□□□□ -0.27
ALPK3-202ENST00000558077 TMEM115Q12893 351 aaPredicted RBP13.39□□□□□ -0.27
ALPK3-202ENST00000558077 SNX1Q13596 522 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 PEX6Q13608 980 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 CCNG2Q16589 344 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.39□□□□□ -0.27
ALPK3-202ENST00000558077 ZDHHC20Q5W0Z9 365 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 IYDQ6PHW0 289 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 XKR5Q6UX68 686 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 PHYKPLQ8IUZ5 450 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 CCNJLQ8IV13 435 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 SFRP1Q8N474 314 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 TAB3Q8N5C8 712 aaPredicted RBP13.39□□□□□ -0.27
ALPK3-202ENST00000558077 RASGEF1AQ8N9B8 481 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 Q8N9G6 341 aaPredicted RBP13.39□□□□□ -0.27
ALPK3-202ENST00000558077 DDHD1Q8NEL9 900 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 ZNF398Q8TD17 642 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 SLC37A2Q8TED4 501 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 NXPE2Q96DL1 559 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 CCDC97Q96F63 343 aaPredicted RBP13.39□□□□□ -0.27
ALPK3-202ENST00000558077 PPP1R2P1Q96PQ5 205 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 C19orf43Q9BQ61 176 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 ETNK1Q9HBU6 452 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 SMOXQ9NWM0 555 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.39□□□□□ -0.27
ALPK3-202ENST00000558077 SCHIP1Q9P0W5 487 aaPredicted RBP13.39□□□□□ -0.27
ALPK3-202ENST00000558077 ATXN7L1Q9ULK2 861 aaPredicted RBP13.39□□□□□ -0.27
ALPK3-202ENST00000558077 DRG1Q9Y295 367 aaKnown RBP13.39□□□□□ -0.27
ALPK3-202ENST00000558077 RAXQ9Y2V3 346 aa13.39□□□□□ -0.27
ALPK3-202ENST00000558077 PIKFYVEQ9Y2I7 2098 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 TRBV23OR9-2A0A075B6M9 112 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 D6RAR5 112 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 SGTAO43765 313 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 VEGFDO43915 354 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 BRINP1O60477 761 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 DXOO77932 396 aaKnown RBP13.38□□□□□ -0.27
ALPK3-202ENST00000558077 CDK14O94921 469 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 MPOP05164 745 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 ZSCAN5DPP0CG00 497 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 ZNF7P17097 686 aaPredicted RBP13.38□□□□□ -0.27
ALPK3-202ENST00000558077 CD1CP29017 333 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 CXCR5P32302 372 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 GRIA1P42261 906 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 FASLGP48023 281 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 LSSP48449 732 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 SPIDRQ14159 915 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 GPRC6AQ5T6X5 926 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 CRTC3Q6UUV7 619 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 ZNF574Q6ZN55 896 aaPredicted RBP13.38□□□□□ -0.27
ALPK3-202ENST00000558077 SLITRK4Q8IW52 837 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 GRAMD1AQ96CP6 724 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 LRRC40Q9H9A6 602 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 ASCL3Q9NQ33 180 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 PRDM8Q9NQV8 689 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 KLC4Q9NSK0 619 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 PIH1D1Q9NWS0 290 aaKnown RBP13.38□□□□□ -0.27
ALPK3-202ENST00000558077 FEZ2Q9UHY8 353 aaPredicted RBP13.38□□□□□ -0.27
ALPK3-202ENST00000558077 ZNF148Q9UQR1 794 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 PKP3Q9Y446 797 aa13.38□□□□□ -0.27
ALPK3-202ENST00000558077 ADAMTS20P59510 1910 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 C2orf81A6NN90 581 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 CCL22O00626 93 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 KMOO15229 486 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms