RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 DCUN1D1Q96GG9 259 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 SGSM3Q96HU1 749 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 TTC25Q96NG3 672 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 TTC1Q99614 292 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 COPS8Q99627 209 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 ZCCHC2Q9C0B9 1178 aaKnown RBP21.05■□□□□ 0.96
CASC4-204ENST00000557945 ERVMER34-1Q9H9K5 563 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 CYP4F12Q9HCS2 524 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 MARCH4Q9P2E8 410 aaPredicted RBP21.05■□□□□ 0.96
CASC4-204ENST00000557945 ATXN10Q9UBB4 475 aa21.05■□□□□ 0.96
CASC4-204ENST00000557945 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.05■□□□□ 0.96
CASC4-204ENST00000557945 TRBV5-4A0A0C4DH59 114 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 PRSS38A1L453 326 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 AGAP14A8MT82 685 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 TNFRSF10CO14798 259 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 SCAMP1O15126 338 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 CDK14O94921 469 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 ACRV1P26436 265 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 GTF2H3Q13889 308 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 DBN1Q16643 649 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 ERCC6LQ2NKX8 1250 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 AARS2Q5JTZ9 985 aaKnown RBP21.04■□□□□ 0.96
CASC4-204ENST00000557945 LYPLAL1Q5VWZ2 237 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 KCTD16Q68DU8 428 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 MRNIPQ6NTE8 343 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 LDB1Q86U70 411 aaPredicted RBP21.04■□□□□ 0.96
CASC4-204ENST00000557945 UNC5BQ8IZJ1 945 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 OXR1Q8N573 874 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 PNPLA1Q8N8W4 532 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 OR2I1PQ8NGU4 316 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 ELF4Q99607 663 aaPredicted RBP21.04■□□□□ 0.96
CASC4-204ENST00000557945 GAREM1Q9H706 876 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 CARS2Q9HA77 564 aaKnown RBP21.04■□□□□ 0.96
CASC4-204ENST00000557945 PLAC1Q9HBJ0 212 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 PPANQ9NQ55 473 aaKnown RBP21.04■□□□□ 0.96
CASC4-204ENST00000557945 ZDHHC3Q9NYG2 299 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 VPS18Q9P253 973 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 SLC17A4Q9Y2C5 497 aa21.04■□□□□ 0.96
CASC4-204ENST00000557945 LNP1A1A4G5 178 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 VEGFDO43915 354 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 RASGRP1O95267 797 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 CER1O95813 267 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 TNFP01375 233 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 ERVK-10P10266 1014 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 RALBP11234 206 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 ZNF8P17098 575 aaPredicted RBP21.03■□□□□ 0.96
CASC4-204ENST00000557945 JUNDP17535 347 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 PMLP29590 882 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 PPARGP37231 505 aaPredicted RBP21.03■□□□□ 0.96
CASC4-204ENST00000557945 GNPDA1P46926 289 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 ARRB1P49407 418 aaPredicted RBP21.03■□□□□ 0.96
CASC4-204ENST00000557945 TMEM115Q12893 351 aaPredicted RBP21.03■□□□□ 0.96
CASC4-204ENST00000557945 SEMA3AQ14563 771 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 CERS6Q6ZMG9 384 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 SDCCAG8Q86SQ7 713 aaPredicted RBP21.03■□□□□ 0.96
CASC4-204ENST00000557945 KCNMB4Q86W47 210 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 GSPT2Q8IYD1 628 aaKnown RBP21.03■□□□□ 0.96
CASC4-204ENST00000557945 PHACTR4Q8IZ21 702 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 IL21RQ9HBE5 538 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 KLF15Q9UIH9 416 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 PNMA8BQ9ULN7 279 aaPredicted RBP21.03■□□□□ 0.96
CASC4-204ENST00000557945 SUFUQ9UMX1 484 aa21.03■□□□□ 0.96
CASC4-204ENST00000557945 CFAP99D6REC4 459 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 H3BM21 787 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 CSF2P04141 144 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 IVLP07476 585 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 SSTR1P30872 391 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 BLKP51451 505 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 HK3P52790 923 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 ZNF423Q2M1K9 1284 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 AASDHQ4L235 1098 aaPredicted RBP21.02■□□□□ 0.96
CASC4-204ENST00000557945 HSP90AA5PQ58FG0 334 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 ZNF470Q6ECI4 717 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 PRR23CQ6ZRP0 262 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 DET1Q7L5Y6 550 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 GSDMBQ8TAX9 411 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 HEXDCQ8WVB3 486 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 CERS2Q96G23 380 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 SLC13A1Q9BZW2 595 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 TCEAL2Q9H3H9 227 aaPredicted RBP21.02■□□□□ 0.96
CASC4-204ENST00000557945 CAAP1Q9H8G2 361 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 IARS2Q9NSE4 1012 aaKnown RBP21.02■□□□□ 0.96
CASC4-204ENST00000557945 ZNHIT2Q9UHR6 403 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 PRKAB1Q9Y478 270 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 GPSM3Q9Y4H4 160 aa21.02■□□□□ 0.96
CASC4-204ENST00000557945 NUAK1O60285 661 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 DFNA5O60443 496 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 NDUFS3O75489 264 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 FUCA1P04066 466 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 NME1P15531 152 aaKnown RBP21.01■□□□□ 0.95
CASC4-204ENST00000557945 TNFRSF8P28908 595 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 TTPAP49638 278 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 IL9RQ01113 521 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 TCEA2Q15560 299 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 TRMT10BQ6PF06 316 aaKnown RBP21.01■□□□□ 0.95
CASC4-204ENST00000557945 CRTC3Q6UUV7 619 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 C3orf62Q6ZUJ4 267 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 GALNT13Q8IUC8 556 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 RBFAQ8N0V3 343 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 MINDY1Q8N5J2 469 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms