RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 GLOD4Q9HC38 313 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 KLC4Q9NSK0 619 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 OCIAD1Q9NX40 245 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 NFKBIL1Q9UBC1 381 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-235ENST00000557740 INTUQ9ULD6 942 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 HYOU1Q9Y4L1 999 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 HEMK1Q9Y5R4 338 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-235ENST00000557740 FLNBO75369 2602 aaKnown RBP14.45□□□□□ -0.1
SHMT2-235ENST00000557740 LILRA5A6NI73 299 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 A8MU76 341 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 PSTPIP1O43586 416 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 PMPCBO75439 489 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 MT-CYBP00156 380 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-235ENST00000557740 COMTP21964 271 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 PTPN3P26045 913 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 NOP2P46087 812 aaKnown RBP14.45□□□□□ -0.1
SHMT2-235ENST00000557740 NR2C2P49116 596 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 PRKD1Q15139 912 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-235ENST00000557740 TEX44Q53QW1 395 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 ANKS6Q68DC2 871 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 TMC3Q7Z5M5 1100 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 TRIM48Q8IWZ4 208 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 CACNA2D3Q8IZS8 1091 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 RNF214Q8ND24 703 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 SPATA22Q8NHS9 363 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 TFB1MQ8WVM0 346 aaKnown RBP14.45□□□□□ -0.1
SHMT2-235ENST00000557740 NKD1Q969G9 470 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 TADA1Q96BN2 335 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 TRIM39Q9HCM9 518 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 PRDM8Q9NQV8 689 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 PDP2Q9P2J9 529 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 CPNE7Q9UBL6 633 aa14.45□□□□□ -0.1
SHMT2-235ENST00000557740 PDZK1P1A8MUH7 402 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 AKR1B15C9JRZ8 316 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-235ENST00000557740 KMOO15229 486 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 MTSS1O43312 755 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 SLC28A2O43868 658 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 BPIP17213 487 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 WT1P19544 449 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-235ENST00000557740 UGT1A3P35503 534 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 CDKN2BP42772 138 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 ARSDP51689 593 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 CLCNKAP51800 687 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 NFATC3Q12968 1075 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 LINC00303Q3SY05 128 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 KAZNQ674X7 775 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 PRICKLE2Q7Z3G6 844 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 ARHGAP22Q7Z5H3 698 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 ADGRG6Q86SQ4 1221 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 LRRTM4Q86VH4 590 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 EXD3Q8N9H8 876 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 TEKT5Q96M29 485 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 FAM117AQ9C073 453 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 UBP1Q9NZI7 540 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 SAE1Q9UBE0 346 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-235ENST00000557740 KLHL3Q9UH77 587 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 FAM153AQ9UHL3 310 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 ADGRG1Q9Y653 693 aa14.44□□□□□ -0.1
SHMT2-235ENST00000557740 CHUKO15111 745 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 VEGFDO43915 354 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 RAD1O60671 282 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 CST8O60676 142 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 MTX2O75431 263 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 VIPP01282 170 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 FAM87AP0C7U9 286 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 SFTPCP11686 197 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 PECAM1P16284 738 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-235ENST00000557740 ZNF7P17097 686 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-235ENST00000557740 VCLP18206 1134 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 UBE2IP63279 158 aaKnown RBP14.43□□□□□ -0.1
SHMT2-235ENST00000557740 CYP4F2P78329 520 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 GTF2H3Q13889 308 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 TCEAL1Q15170 157 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 SEPT7Q16181 437 aaKnown RBP14.43□□□□□ -0.1
SHMT2-235ENST00000557740 TBR1Q16650 682 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 CEACAM20Q6UY09 585 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 SPOCD1Q6ZMY3 1216 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 PLXDC1Q8IUK5 500 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 CCDC50Q8IVM0 306 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 BMPERQ8N8U9 685 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 GDAP1Q8TB36 358 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 HTR3CQ8WXA8 447 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 P3H4Q92791 437 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 KIAA1143Q96AT1 154 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-235ENST00000557740 PLEKHG4BQ96PX9 1271 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 CTRCQ99895 268 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 ZPBPQ9BS86 351 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 TIMM29Q9BSF4 260 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 TBC1D10AQ9BXI6 508 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 BPIFA1Q9NP55 256 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 KLHL8Q9P2G9 620 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-235ENST00000557740 DNAJC16Q9Y2G8 782 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 SPO11Q9Y5K1 396 aa14.43□□□□□ -0.1
SHMT2-235ENST00000557740 MN1Q10571 1320 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-235ENST00000557740 TLN1Q9Y490 2541 aaKnown RBP14.42□□□□□ -0.1
SHMT2-235ENST00000557740 SDK2Q58EX2 2172 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 F5H423 210 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-235ENST00000557740 CDK14O94921 469 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 LIFP15018 202 aa14.42□□□□□ -0.1
SHMT2-235ENST00000557740 NFKB1P19838 968 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms