RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 FGF22Q9HCT0 170 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 GEMIN8Q9NWZ8 242 aaKnown RBP16.52■□□□□ 0.24
NEK9-211ENST00000557673 FOXJ2Q9P0K8 574 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 RHPN2P1A8MT19 583 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 C9orf172C9J069 976 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 CYP2A6P11509 494 aaPredicted RBP16.51■□□□□ 0.23
NEK9-211ENST00000557673 ETV5P41161 510 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 ETV3P41162 512 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 B4GALNT1Q00973 533 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 SRSF6Q13247 344 aaKnown RBP16.51■□□□□ 0.23
NEK9-211ENST00000557673 BIRC2Q13490 618 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 CCNG2Q16589 344 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 ANKRD20A2Q5SQ80 823 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 ANKRD20A1Q5TYW2 823 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 ANKRD20A3Q5VUR7 823 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 ITPRIPL1Q6GPH6 555 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 ZNF574Q6ZN55 896 aaPredicted RBP16.51■□□□□ 0.23
NEK9-211ENST00000557673 USP45Q70EL2 814 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 HSD11B1LQ7Z5J1 315 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 FAM71DQ8N9W8 422 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 SPATA22Q8NHS9 363 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 CCDC110Q8TBZ0 833 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 SCRN2Q96FV2 425 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 C16orf45Q96MC5 204 aaPredicted RBP16.51■□□□□ 0.23
NEK9-211ENST00000557673 GORASP1Q9BQQ3 440 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 GSDMCQ9BYG8 508 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 ADNPQ9H2P0 1102 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 MRPL40Q9NQ50 206 aaKnown RBP16.51■□□□□ 0.23
NEK9-211ENST00000557673 RSPH14Q9UHP6 348 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 MOSPD1Q9UJG1 213 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 SAR1BQ9Y6B6 198 aa16.51■□□□□ 0.23
NEK9-211ENST00000557673 PRSS38A1L453 326 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 C5orf60A6NFR6 353 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 F5H423 210 aaPredicted RBP16.5■□□□□ 0.23
NEK9-211ENST00000557673 AGRPO00253 132 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 NFKBIAP25963 317 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 PSMB4P28070 264 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 ALDH4A1P30038 563 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 GPR3P46089 330 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 ILF3Q12906 894 aaKnown RBP eCLIP16.5■□□□□ 0.23
NEK9-211ENST00000557673 SNX1Q13596 522 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 AMZ1Q400G9 498 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 PNCKQ6P2M8 343 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 PID1Q7Z2X4 250 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 DTD2Q96FN9 168 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 OXNAD1Q96HP4 312 aaPredicted RBP16.5■□□□□ 0.23
NEK9-211ENST00000557673 FCRL5Q96RD9 977 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 TAAR9Q96RI9 348 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 TRIB3Q96RU7 358 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 LGR4Q9BXB1 951 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 SEMA6CQ9H3T2 930 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 CHKBQ9Y259 395 aa16.5■□□□□ 0.23
NEK9-211ENST00000557673 UBR5O95071 2799 aaPredicted RBP16.5■□□□□ 0.23
NEK9-211ENST00000557673 MT-CYBP00156 380 aaPredicted RBP16.49■□□□□ 0.23
NEK9-211ENST00000557673 PRLP01236 227 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 MYCLP1P12525 358 aaPredicted RBP16.49■□□□□ 0.23
NEK9-211ENST00000557673 NFKB2Q00653 900 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 TRA2AQ13595 282 aaKnown RBP eCLIP16.49■□□□□ 0.23
NEK9-211ENST00000557673 CYP1B1Q16678 543 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 LRRC66Q68CR7 880 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 KDELC1Q6UW63 502 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 SYT10Q6XYQ8 523 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 RFLNAQ6ZTI6 216 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 Q6ZVL8 140 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 ZNF438Q7Z4V0 828 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 CBARPQ8N350 705 aaPredicted RBP16.49■□□□□ 0.23
NEK9-211ENST00000557673 GPBAR1Q8TDU6 330 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 ZDHHC1Q8WTX9 485 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 DPYSL5Q9BPU6 564 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 AP1M1Q9BXS5 423 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 ZNF106Q9H2Y7 1883 aaKnown RBP16.49■□□□□ 0.23
NEK9-211ENST00000557673 CARS2Q9HA77 564 aaKnown RBP16.49■□□□□ 0.23
NEK9-211ENST00000557673 RDH14Q9HBH5 336 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 PCDH9Q9HC56 1237 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 PHPT1Q9NRX4 125 aaPredicted RBP16.49■□□□□ 0.23
NEK9-211ENST00000557673 HOMER3Q9NSC5 361 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 TRNAU1APQ9NX07 287 aaKnown RBP16.49■□□□□ 0.23
NEK9-211ENST00000557673 FAM153AQ9UHL3 310 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 ZNF148Q9UQR1 794 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 PPIL1Q9Y3C6 166 aa16.49■□□□□ 0.23
NEK9-211ENST00000557673 A0A0J9YYE9 177 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 GOLGA6CA6NDK9 693 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 GOLGA6BA6NDN3 693 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 PSMD11O00231 422 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 B4GAT1O43505 415 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 PMPCBO75439 489 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 TRBC1P01850 177 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 GOLGA6DP0CG33 693 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 EPHB1P54762 984 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 OR1D5P58170 312 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 RPL26P61254 145 aaKnown RBP16.48■□□□□ 0.23
NEK9-211ENST00000557673 NR1D2Q14995 579 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 C16orf72Q14CZ0 275 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 PCSK7Q16549 785 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 P3H1Q32P28 736 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 BORAQ6PGQ7 559 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 ARHGEF18Q6ZSZ5 1173 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 TMPRSS9Q7Z410 1059 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 HEATR4Q86WZ0 1026 aa16.48■□□□□ 0.23
NEK9-211ENST00000557673 C17orf82Q86X59 251 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms