RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CASP10Q92851 521 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 FATE1Q969F0 183 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 KIAA1191Q96A73 305 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 ZNF599Q96NL3 588 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 KLHL5Q96PQ7 755 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 NEURL2Q9BR09 285 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 PIF1Q9H611 641 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 NOL6Q9H6R4 1146 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 SYTL2Q9HCH5 934 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 INTS7Q9NVH2 962 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 ZIM2Q9NZV7 527 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 PCDHB3Q9Y5E6 796 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 A0A1B0GTL3 188 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 FAM234BA2RU67 622 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 KPNA4O00629 521 aaPredicted RBP11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 KPNA6O60684 536 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 RSL1D1O76021 490 aaKnown RBP11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 OR4D2P58180 307 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 NRG1Q02297 640 aaPredicted RBP11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 SKIV2LQ15477 1246 aaKnown RBP11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 DPP9Q86TI2 863 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 ITIH5Q86UX2 942 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 HID1Q8IV36 788 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 C3orf58Q8NDZ4 430 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 TMBIM1Q969X1 311 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 TMEM209Q96SK2 561 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 AARSD1Q9BTE6 412 aaKnown RBP11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 ABHD16BQ9H3Z7 469 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 AGO3Q9H9G7 860 aaKnown RBP11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 SP110Q9HB58 689 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 NTN4Q9HB63 628 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 TRNAU1APQ9NX07 287 aaKnown RBP11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 SLAMF8Q9P0V8 285 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 UXTQ9UBK9 157 aaPredicted RBP11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 USP22Q9UPT9 525 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 J3KR12 359 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 TREHO43280 583 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 PRSS23O95084 383 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 HPRP00739 348 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 ALPLP05186 524 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 RAP2AP10114 183 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 UROSP10746 265 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 CES1P23141 567 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 CRHBPP24387 322 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 TPD52P55327 224 aaPredicted RBP11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 ERVK-8P63133 956 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 ACVR1Q04771 509 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 YWHAHQ04917 246 aaPredicted RBP11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 MFSD10Q14728 455 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 FAM98BQ52LJ0 330 aaKnown RBP11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 XKR7Q5GH72 579 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 TTC23Q5W5X9 447 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 GTF2IRD2BQ6EKJ0 949 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 FAM171BQ6P995 826 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 PRR23BQ6ZRT6 265 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 R3HCC1LQ7Z5L2 792 aaKnown RBP11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 GTF2IRD2Q86UP8 949 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 STK32CQ86UX6 486 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 IGFN1Q86VF2 1251 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 METTL23Q86XA0 190 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 UMODL1-AS1Q8N2C9 162 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 HDAC2Q92769 488 aaKnown RBP11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 SDCCAG3Q96C92 435 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 HMCESQ96FZ2 354 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 RDH12Q96NR8 316 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 GAD1Q99259 594 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 RTP3Q9BQQ7 232 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 ACBD6Q9BR61 282 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 ARMC7Q9H6L4 198 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 TMEM45AQ9NWC5 275 aa11.73□□□□□ -0.53
VIPAS39-211ENST00000557658 ANKRD36A6QL64 1941 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 GRXCR2A6NFK2 248 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 MEIS3P2A8K0S8 358 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 SYCE1LA8MT33 242 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 UPK1AO00322 258 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 KCNH1O95259 989 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 RPS17P08708 135 aaKnown RBP11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 ATXN1LP0C7T5 689 aaKnown RBP11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 ODC1P11926 461 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 OGNP20774 298 aaKnown RBP11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 PLA2G16P53816 162 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 MLLT6P55198 1093 aaPredicted RBP11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 ADAM17P78536 824 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 CHRNB3Q05901 458 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 EPS8Q12929 822 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 TRIM16LQ309B1 348 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 SPARTQ8N0X7 666 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 ITFG1Q8TB96 612 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 PEX13Q92968 403 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 AURKBQ96GD4 344 aaPredicted RBP11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 ZNF347Q96SE7 839 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 CSF3RQ99062 836 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 DERL2Q9GZP9 239 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 MAGEE1Q9HCI5 957 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 CATSPERZQ9NTU4 200 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 WARS2Q9UGM6 360 aaKnown RBP11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 LOC285095A0A1B0GVY8 99 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 CCDC162PA2VCL2 907 aa11.72□□□□□ -0.53
VIPAS39-211ENST00000557658 ADAM23O75077 832 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms