RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 BPIFB4P59827 614 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 NOMO3P69849 1222 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 GRM3Q14832 879 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 PARP15Q460N3 678 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 AFMIDQ63HM1 303 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 DPY19L2P1Q6NXN4 242 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 PNCKQ6P2M8 343 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 DPPA4Q7L190 304 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 TIPARPQ7Z3E1 657 aaKnown RBP5.83□□□□□ -1.48
VPS33B-207ENST00000557470 BTLAQ7Z6A9 289 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 LSRQ86X29 649 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-207ENST00000557470 ZNF761Q86XN6 746 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-207ENST00000557470 ELOA2Q8IYF1 753 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-207ENST00000557470 NAGSQ8N159 534 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 MSANTD4Q8NCY6 345 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 JOSD2Q8TAC2 188 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 FAM172AQ8WUF8 416 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 RXFP2Q8WXD0 754 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 CENPIQ92674 756 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-207ENST00000557470 RTP4Q96DX8 246 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 TEFMQ96QE5 360 aaKnown RBP5.83□□□□□ -1.48
VPS33B-207ENST00000557470 TUBGCP5Q96RT8 1024 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 FRMD8Q9BZ67 464 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-207ENST00000557470 PDFQ9HBH1 243 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 KCNK4Q9NYG8 393 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 NOP53Q9NZM5 478 aaKnown RBP5.83□□□□□ -1.48
VPS33B-207ENST00000557470 UBA2Q9UBT2 640 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-207ENST00000557470 PRDM4Q9UKN5 801 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 SUFUQ9UMX1 484 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 FHOD1Q9Y613 1164 aa5.83□□□□□ -1.48
VPS33B-207ENST00000557470 DOPEY1Q5JWR5 2465 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 TMEM238LA0A1B0GVL6 79 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 C2CD4BA6NLJ0 364 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 ENO4A6NNW6 628 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 A8MU76 341 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 WASH4PA8MWX3 477 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 J3KR12 359 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 M0R082 166 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 PDE2AO00408 941 aaPredicted RBP5.82□□□□□ -1.48
VPS33B-207ENST00000557470 TRAFD1O14545 582 aaPredicted RBP5.82□□□□□ -1.48
VPS33B-207ENST00000557470 PRAMEF11O60813 436 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 STK17BO94768 372 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 ALBP02768 609 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 FURINP09958 794 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 RNF224P0DH78 156 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 EPB42P16452 691 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 TCN2P20062 427 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 GNLYP22749 145 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 SERPINA4P29622 427 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 ACTR1BP42025 376 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 STAT5AP42229 794 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 POLD2P49005 469 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 YBEYP58557 167 aaPredicted RBP5.82□□□□□ -1.48
VPS33B-207ENST00000557470 ACTR1AP61163 376 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 GPLD1P80108 840 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 MC1RQ01726 317 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 ABHD18Q0P651 414 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 ACOX1Q15067 660 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 HGSNATQ68CP4 663 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 CAPRIN2Q6IMN6 1127 aaKnown RBP5.82□□□□□ -1.48
VPS33B-207ENST00000557470 TCTN3Q6NUS6 607 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 TMEM71Q6P5X7 295 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 ASB18Q6ZVZ8 466 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 STRADAQ7RTN6 431 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 KDELC2Q7Z4H8 507 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 SRLQ86TD4 932 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 HEATR4Q86WZ0 1026 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 UMODL1-AS1Q8N2C9 162 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 C19orf47Q8N9M1 422 aaKnown RBP5.82□□□□□ -1.48
VPS33B-207ENST00000557470 VPS37AQ8NEZ2 397 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 FBXO27Q8NI29 283 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 SLC30A5Q8TAD4 765 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 ZNF417Q8TAU3 575 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 SLC20A1Q8WUM9 679 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 NTAN1Q96AB6 310 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 ECHDC3Q96DC8 303 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 NUS1Q96E22 293 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 RNF31Q96EP0 1072 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 CELF6Q96J87 481 aaKnown RBP5.82□□□□□ -1.48
VPS33B-207ENST00000557470 COQ10AQ96MF6 247 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 NSMCE3Q96MG7 304 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 ZNF587Q96SQ5 575 aaPredicted RBP5.82□□□□□ -1.48
VPS33B-207ENST00000557470 DPYSL5Q9BPU6 564 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 C11orf70Q9BRQ4 267 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 EFHD1Q9BUP0 239 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 TEX101Q9BY14 249 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 ATP13A3Q9H7F0 1226 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 APMAPQ9HDC9 416 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 LUC7LQ9NQ29 371 aaKnown RBP5.82□□□□□ -1.48
VPS33B-207ENST00000557470 PHPT1Q9NRX4 125 aaPredicted RBP5.82□□□□□ -1.48
VPS33B-207ENST00000557470 TRNAU1APQ9NX07 287 aaKnown RBP5.82□□□□□ -1.48
VPS33B-207ENST00000557470 PDP2Q9P2J9 529 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 B4GALT6Q9UBX8 382 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 RWDD2AQ9UIY3 292 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 PLEKHM1Q9Y4G2 1056 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 MRPS18BQ9Y676 258 aaKnown RBP5.82□□□□□ -1.48
VPS33B-207ENST00000557470 KCNMB2Q9Y691 235 aa5.82□□□□□ -1.48
VPS33B-207ENST00000557470 A1L4Q6 167 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 F8VZ95 297 aa5.81□□□□□ -1.48
VPS33B-207ENST00000557470 MKRN2OSH3BPM6 223 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms