RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 ZFYVE1Q9HBF4 777 aa15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 NEU3Q9UQ49 428 aa15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 RGPD3A6NKT7 1758 aaPredicted RBP15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 RGPD4Q7Z3J3 1758 aa15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 PRMT5O14744 637 aaPredicted RBP15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 PRAMEF12O95522 483 aa15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 PEX11BO96011 259 aa15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 GSNP06396 782 aa15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 FAM58BPP0C7Q3 252 aa15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 ZNF7P17097 686 aaPredicted RBP15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 EFNA1P20827 205 aaPredicted RBP15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 RPL10P27635 214 aaKnown RBP15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 STK19P49842 368 aaPredicted RBP15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 ADGRE1Q14246 886 aa15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 MBOAT1Q6ZNC8 495 aa15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 CNTN4Q8IWV2 1026 aa15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 NKAPQ8N5F7 415 aaKnown RBP15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 OR10Q1Q8NGQ4 319 aa15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 FBXO30Q8TB52 745 aa15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 CASD1Q96PB1 797 aa15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 POLG2Q9UHN1 485 aa15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 POLR3HQ9Y535 204 aaPredicted RBP15.21■□□□□ 0.03
TMEM55B-207ENST00000557041 SMAD6O43541 496 aaKnown RBP15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 UGT2B4P06133 528 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 MTPNP58546 118 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 TRMOQ9BU70 441 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 SBF1O95248 1867 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 BMP1P13497 986 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 ALOX15P16050 662 aaPredicted RBP15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 HOXD9P28356 352 aaPredicted RBP15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 MAGEA11P43364 429 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 CDH15P55291 814 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 OFCC1Q8IZS5 231 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 CMTM8Q8IZV2 173 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 CATSPER1Q8NEC5 780 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 NR1H4Q96RI1 486 aaPredicted RBP15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 TRIM15Q9C019 465 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 ING2Q9H160 280 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 SOX17Q9H6I2 414 aaPredicted RBP15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 IPPKQ9H8X2 491 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 ARL15Q9NXU5 204 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 DHRS12A0PJE2 317 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 CYBBP04839 570 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 ALDOCP09972 364 aaKnown RBP15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 CALRP27797 417 aaKnown RBP15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 LIN52Q52LA3 116 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 AARS2Q5JTZ9 985 aaKnown RBP15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 TTC33Q6PID6 262 aaPredicted RBP15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 RBM44Q6ZP01 1051 aaKnown RBP15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 APCDD1Q8J025 514 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 FAM47BQ8NA70 645 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 ISL2Q96A47 359 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 C2orf49Q9BVC5 232 aaPredicted RBP15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 ADNPQ9H2P0 1102 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 PCDHGB4Q9UN71 923 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 PCDHGB5Q9Y5G0 923 aa15.2■□□□□ 0.02
TMEM55B-207ENST00000557041 AXIN1O15169 862 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 PLCL1Q15111 1095 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 AP5B1Q2VPB7 878 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 PGS1Q32NB8 556 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 LILRA2Q8N149 483 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 CBR4Q8N4T8 237 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 MYO19Q96H55 970 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 ZNF558Q96NG5 402 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 MRPL17Q9NRX2 175 aaKnown RBP15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 VPS51Q9UID3 782 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 KRT87PA6NCN2 255 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 UPK3BL1B0FP48 263 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 UPK3BL2E5RIL1 263 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 SLC22A3O75751 556 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 POLD2P49005 469 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 TAF1AQ15573 450 aaPredicted RBP15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 GSTA3Q16772 222 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 DDX53Q86TM3 631 aaKnown RBP15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 ANKRD46Q86W74 232 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 CCDC90BQ9GZT6 254 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 VCX3AQ9NNX9 186 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 SLAMF8Q9P0V8 285 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 VPS9D1Q9Y2B5 631 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 TARM1B6A8C7 271 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 ATP6V1B2P21281 511 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 HOXC13P31276 330 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 IRF5Q13568 498 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 TRIM71Q2Q1W2 868 aaKnown RBP15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 ZNF461Q8TAF7 563 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 UBXN10Q96LJ8 280 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 PRICKLE1Q96MT3 831 aaPredicted RBP15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 MRM3Q9HC36 420 aaKnown RBP15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 PCDHGA7Q9Y5G6 932 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 U3KQV3 271 aa15.19■□□□□ 0.02
TMEM55B-207ENST00000557041 LOC285095A0A1B0GVY8 99 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 A6NHS1 94 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 FBP2O00757 339 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 CCL16O15467 120 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 HIST1H2AGP0C0S8 130 aaPredicted RBP15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 ATXN8OSP0DMR3 200 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 HIST1H2ADP20671 130 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 CAPN3P20807 821 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 FASP25445 335 aa15.18■□□□□ 0.02
TMEM55B-207ENST00000557041 FBXL19Q6PCT2 694 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms