RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 SKIDA1Q1XH10 827 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 GPR33Q49SQ1 333 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 C14orf28Q4W4Y0 310 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 SLC30A9Q6PML9 568 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 CCNI2Q6ZMN8 369 aaPredicted RBP10.56□□□□□ -0.72
LINC00239-201ENST00000556973 EFL1Q7Z2Z2 1120 aaKnown RBP10.56□□□□□ -0.72
LINC00239-201ENST00000556973 LRRTM4Q86VH4 590 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 C17orf82Q86X59 251 aaPredicted RBP10.56□□□□□ -0.72
LINC00239-201ENST00000556973 OR13C4Q8NGS5 318 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 WDR48Q8TAF3 677 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 CDKN2AIPNLQ96HQ2 116 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 RANBP9Q96S59 729 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 ZCCHC2Q9C0B9 1178 aaKnown RBP10.56□□□□□ -0.72
LINC00239-201ENST00000556973 CASS4Q9NQ75 786 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 PIH1D1Q9NWS0 290 aaKnown RBP10.56□□□□□ -0.72
LINC00239-201ENST00000556973 RNF14Q9UBS8 474 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 FKBPLQ9UIM3 349 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 KLK13Q9UKR3 277 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 PRKAB1Q9Y478 270 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 PLEKHM1Q9Y4G2 1056 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 PCYT1BQ9Y5K3 369 aaPredicted RBP10.56□□□□□ -0.72
LINC00239-201ENST00000556973 SLC30A1Q9Y6M5 507 aa10.56□□□□□ -0.72
LINC00239-201ENST00000556973 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.55□□□□□ -0.72
LINC00239-201ENST00000556973 B4DGG1 531 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 ZW10O43264 779 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 NUDT21O43809 227 aaKnown RBP10.55□□□□□ -0.72
LINC00239-201ENST00000556973 OPA1O60313 960 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 PHF2O75151 1096 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 ECEL1O95672 775 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 ACP5P13686 325 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 TPSB2P20231 275 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 FNTAP49354 379 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 SARNPP82979 210 aaKnown RBP10.55□□□□□ -0.72
LINC00239-201ENST00000556973 GPS1Q13098 491 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 SEPT6Q14141 434 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 HLTFQ14527 1009 aaKnown RBP eCLIP10.55□□□□□ -0.72
LINC00239-201ENST00000556973 TPSAB1Q15661 275 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 CERCAMQ5T4B2 595 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 HES3Q5TGS1 186 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 NLRP9Q7RTR0 991 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 SNX20Q7Z614 316 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 NAGSQ8N159 534 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 RASGEF1AQ8N9B8 481 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 KYQ8NBH2 561 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 DDHD1Q8NEL9 900 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 MAPK15Q8TD08 544 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 HEXDCQ8WVB3 486 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 ULK4Q96C45 1275 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 DNAJC1Q96KC8 554 aaKnown RBP10.55□□□□□ -0.72
LINC00239-201ENST00000556973 TIMM29Q9BSF4 260 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 SMARCAL1Q9NZC9 954 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 LRIT1Q9P2V4 623 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 RIMKLBQ9ULI2 386 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 CLCA2Q9UQC9 943 aa10.55□□□□□ -0.72
LINC00239-201ENST00000556973 DNMT3AQ9Y6K1 912 aaPredicted RBP10.55□□□□□ -0.72
LINC00239-201ENST00000556973 OR5K4A6NMS3 321 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 MT-CO3P00414 261 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 RALBP11234 206 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 SLC2A4P14672 509 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 ZNF7P17097 686 aaPredicted RBP10.54□□□□□ -0.72
LINC00239-201ENST00000556973 MSH3P20585 1137 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 ITGALP20701 1170 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 MC4RP32245 332 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 CA5AP35218 305 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 PAFAH1B1P43034 410 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 TARDBPQ13148 414 aaKnown RBP eCLIP10.54□□□□□ -0.72
LINC00239-201ENST00000556973 TRIP13Q15645 432 aaPredicted RBP10.54□□□□□ -0.72
LINC00239-201ENST00000556973 INSCQ1MX18 579 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 KHDC1Q4VXA5 237 aaKnown RBP10.54□□□□□ -0.72
LINC00239-201ENST00000556973 PCID2Q5JVF3 399 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 PERM1Q5SV97 790 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 GPRC6AQ5T6X5 926 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 TSTD2Q5T7W7 516 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 CDCP2Q5VXM1 449 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 LRRC8BQ6P9F7 803 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 CREG2Q8IUH2 290 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 ZNF547Q8IVP9 402 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 ARL14Q8N4G2 192 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 DCBLD1Q8N8Z6 715 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 PPHLN1Q8NEY8 458 aaKnown RBP10.54□□□□□ -0.72
LINC00239-201ENST00000556973 PEX13Q92968 403 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 ZNF514Q96K75 400 aaPredicted RBP10.54□□□□□ -0.72
LINC00239-201ENST00000556973 CCDC3Q9BQI4 270 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 IL22Q9GZX6 179 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 FAM96AQ9H5X1 160 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 KLC4Q9NSK0 619 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 BFARQ9NZS9 450 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 SLC23A2Q9UGH3 650 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 CRLS1Q9UJA2 301 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 KCNK6Q9Y257 313 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 NEU2Q9Y3R4 380 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 RNF215Q9Y6U7 377 aa10.54□□□□□ -0.72
LINC00239-201ENST00000556973 SPEGQ15772 3267 aa10.53□□□□□ -0.72
LINC00239-201ENST00000556973 CACNA1AO00555 2505 aa10.53□□□□□ -0.72
LINC00239-201ENST00000556973 ARHGEF17Q96PE2 2063 aaPredicted RBP10.53□□□□□ -0.72
LINC00239-201ENST00000556973 FAM149AA5PLN7 773 aa10.53□□□□□ -0.72
LINC00239-201ENST00000556973 KLHL33A6NCF5 533 aa10.53□□□□□ -0.72
LINC00239-201ENST00000556973 RHPN2P1A8MT19 583 aa10.53□□□□□ -0.72
LINC00239-201ENST00000556973 CCL22O00626 93 aa10.53□□□□□ -0.72
LINC00239-201ENST00000556973 GPR39O43194 453 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms