RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 HVCN1Q96D96 273 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 CDHR1Q96JP9 859 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 TEFMQ96QE5 360 aaKnown RBP5.29□□□□□ -1.56
HIF1A-209ENST00000556827 CPVLQ9H3G5 476 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 FZD3Q9NPG1 666 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 ALKBH4Q9NXW9 302 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 SUFUQ9UMX1 484 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 UNC80Q8N2C7 3258 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 PLXNA1Q9UIW2 1896 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 NEDD4P46934 1319 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 NRCAMQ92823 1304 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 COL11A1P12107 1806 aaPredicted RBP5.28□□□□□ -1.56
HIF1A-209ENST00000556827 LACTBL1A8MY62 500 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 STMND1H3BQB6 276 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 IFIT3O14879 490 aaKnown RBP5.28□□□□□ -1.56
HIF1A-209ENST00000556827 PER2O15055 1255 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 FIBPO43427 364 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 SLC25A17O43808 307 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 AGR2O95994 175 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 ADAP00813 363 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 IL1AP01583 271 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 LGALS2P05162 132 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 HNRNPA1P09651 372 aaKnown RBP eCLIP5.28□□□□□ -1.56
HIF1A-209ENST00000556827 STAG3L1P0CL83 205 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 IL9P15248 144 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 UBA1P22314 1058 aaKnown RBP5.28□□□□□ -1.56
HIF1A-209ENST00000556827 KIF5BP33176 963 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 PGM1P36871 562 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 DPP6P42658 865 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 SP4Q02446 784 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 BTG3Q14201 252 aaPredicted RBP5.28□□□□□ -1.56
HIF1A-209ENST00000556827 NFIL3Q16649 462 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 ME3Q16798 604 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 WASHC2DQ5SRD0 308 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 SLC16A12Q6ZSM3 486 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 TRAPPC11Q7Z392 1133 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 ZNF589Q86UQ0 364 aaPredicted RBP5.28□□□□□ -1.56
HIF1A-209ENST00000556827 HEATR4Q86WZ0 1026 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 FAM185AQ8N0U4 392 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 ENGASEQ8NFI3 743 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 HDAC7Q8WUI4 952 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 HSPH1Q92598 858 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 CNOT9Q92600 299 aaKnown RBP5.28□□□□□ -1.56
HIF1A-209ENST00000556827 CAMK1GQ96NX5 476 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 CTAGE1Q96RT6 745 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 WDR77Q9BQA1 342 aaPredicted RBP5.28□□□□□ -1.56
HIF1A-209ENST00000556827 C16orf70Q9BSU1 422 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 AZI2Q9H6S1 392 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 SIRT3Q9NTG7 399 aaPredicted RBP5.28□□□□□ -1.56
HIF1A-209ENST00000556827 SETD4Q9NVD3 440 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 GRHL1Q9NZI5 618 aa5.28□□□□□ -1.56
HIF1A-209ENST00000556827 SEC63Q9UGP8 760 aaKnown RBP5.28□□□□□ -1.56
HIF1A-209ENST00000556827 BAZ2AQ9UIF9 1905 aaKnown RBP5.28□□□□□ -1.56
HIF1A-209ENST00000556827 FSD2A1L4K1 749 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 SMCHD1A6NHR9 2005 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 HSPB6O14558 160 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 PPP3CCP48454 512 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 GNAQP50148 359 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 CLCNKBP51801 687 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.27□□□□□ -1.57
HIF1A-209ENST00000556827 TBL3Q12788 808 aaKnown RBP5.27□□□□□ -1.57
HIF1A-209ENST00000556827 TRPC3Q13507 836 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 RPE65Q16518 533 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 SPOUT1Q5T280 376 aaKnown RBP5.27□□□□□ -1.57
HIF1A-209ENST00000556827 RETSATQ6NUM9 610 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 SLC22A25Q6T423 547 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 FAM43BQ6ZT52 329 aaPredicted RBP5.27□□□□□ -1.57
HIF1A-209ENST00000556827 ADGRG6Q86SQ4 1221 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 RPAINQ86UA6 219 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 DNAAF1Q8NEP3 725 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 CTCFLQ8NI51 663 aaPredicted RBP5.27□□□□□ -1.57
HIF1A-209ENST00000556827 CEP76Q8TAP6 659 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 ASB5Q8WWX0 329 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 SEPT1Q8WYJ6 367 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 HTRA1Q92743 480 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 ZBTB10Q96DT7 871 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 ELP4Q96EB1 424 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 RRP36Q96EU6 259 aaKnown RBP5.27□□□□□ -1.57
HIF1A-209ENST00000556827 CD180Q99467 661 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 LZTS2Q9BRK4 669 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 FTHL17Q9BXU8 183 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 ISCUQ9H1K1 167 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 SMARCAD1Q9H4L7 1026 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 TASP1Q9H6P5 420 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 ERAP1Q9NZ08 941 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 GTF2A1LQ9UNN4 478 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 CRYL1Q9Y2S2 319 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 MYH8P13535 1937 aa5.27□□□□□ -1.57
HIF1A-209ENST00000556827 GREB1LQ9C091 1923 aaPredicted RBP5.27□□□□□ -1.57
HIF1A-209ENST00000556827 ZNFX1Q9P2E3 1918 aaKnown RBP5.27□□□□□ -1.57
HIF1A-209ENST00000556827 ADGRA3Q8IWK6 1321 aa5.26□□□□□ -1.57
HIF1A-209ENST00000556827 LRRC37A2A6NM11 1700 aa5.26□□□□□ -1.57
HIF1A-209ENST00000556827 PARP14Q460N5 1801 aa5.26□□□□□ -1.57
HIF1A-209ENST00000556827 PRR23D1E9PI22 279 aaPredicted RBP5.26□□□□□ -1.57
HIF1A-209ENST00000556827 C5orf67F2Z3F1 127 aa5.26□□□□□ -1.57
HIF1A-209ENST00000556827 HOXC11O43248 304 aaPredicted RBP5.26□□□□□ -1.57
HIF1A-209ENST00000556827 CEP104O60308 925 aa5.26□□□□□ -1.57
HIF1A-209ENST00000556827 CSPG5O95196 566 aa5.26□□□□□ -1.57
HIF1A-209ENST00000556827 SERPINC1P01008 464 aa5.26□□□□□ -1.57
HIF1A-209ENST00000556827 PRR23D2P0DMB1 279 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms