RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 DCDC1P59894 354 aa22.32■■□□□ 1.16
ACTN1-220ENST00000556433 CYP4F2P78329 520 aa22.32■■□□□ 1.16
ACTN1-220ENST00000556433 TCEAL1Q15170 157 aa22.32■■□□□ 1.16
ACTN1-220ENST00000556433 SLC14A2Q15849 920 aa22.32■■□□□ 1.16
ACTN1-220ENST00000556433 DCAF12Q5T6F0 453 aa22.32■■□□□ 1.16
ACTN1-220ENST00000556433 BZW1Q7L1Q6 419 aaKnown RBP22.32■■□□□ 1.16
ACTN1-220ENST00000556433 RNF214Q8ND24 703 aa22.32■■□□□ 1.16
ACTN1-220ENST00000556433 GLYATL1Q969I3 302 aa22.32■■□□□ 1.16
ACTN1-220ENST00000556433 UBP1Q9NZI7 540 aa22.32■■□□□ 1.16
ACTN1-220ENST00000556433 SAE1Q9UBE0 346 aaPredicted RBP22.32■■□□□ 1.16
ACTN1-220ENST00000556433 CPNE7Q9UBL6 633 aa22.32■■□□□ 1.16
ACTN1-220ENST00000556433 ADGRG1Q9Y653 693 aa22.32■■□□□ 1.16
ACTN1-220ENST00000556433 A0A0A6YYK5 440 aaPredicted RBP22.31■■□□□ 1.16
ACTN1-220ENST00000556433 PTPN3P26045 913 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 UGT1A3P35503 534 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 NR2C2P49116 596 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 CLCNKAP51800 687 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 EPHA4P54764 986 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 TFDP2Q14188 446 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 LLGL1Q15334 1064 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 ANKS6Q68DC2 871 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 PDPK2PQ6A1A2 396 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 CRTC3Q6UUV7 619 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 ARHGAP22Q7Z5H3 698 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 CNGA4Q8IV77 575 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 IL22RA1Q8N6P7 574 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 TEKT5Q96M29 485 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 SRPK1Q96SB4 655 aaKnown RBP22.31■■□□□ 1.16
ACTN1-220ENST00000556433 TBC1D10AQ9BXI6 508 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 OSGEPL1Q9H4B0 414 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 NFKBIL1Q9UBC1 381 aaPredicted RBP22.31■■□□□ 1.16
ACTN1-220ENST00000556433 SDK2Q58EX2 2172 aa22.31■■□□□ 1.16
ACTN1-220ENST00000556433 GPR89AB7ZAQ6 455 aa22.3■■□□□ 1.16
ACTN1-220ENST00000556433 AKR1B15C9JRZ8 316 aaPredicted RBP22.3■■□□□ 1.16
ACTN1-220ENST00000556433 CST8O60676 142 aa22.3■■□□□ 1.16
ACTN1-220ENST00000556433 GPR89BP0CG08 455 aa22.3■■□□□ 1.16
ACTN1-220ENST00000556433 BPIP17213 487 aa22.3■■□□□ 1.16
ACTN1-220ENST00000556433 CDKN2BP42772 138 aa22.3■■□□□ 1.16
ACTN1-220ENST00000556433 RAB15P59190 212 aa22.3■■□□□ 1.16
ACTN1-220ENST00000556433 TBR1Q16650 682 aa22.3■■□□□ 1.16
ACTN1-220ENST00000556433 KAZNQ674X7 775 aa22.3■■□□□ 1.16
ACTN1-220ENST00000556433 BMPERQ8N8U9 685 aa22.3■■□□□ 1.16
ACTN1-220ENST00000556433 AVL9Q8NBF6 648 aa22.3■■□□□ 1.16
ACTN1-220ENST00000556433 TFB1MQ8WVM0 346 aaKnown RBP22.3■■□□□ 1.16
ACTN1-220ENST00000556433 PLEKHG4BQ96PX9 1271 aa22.3■■□□□ 1.16
ACTN1-220ENST00000556433 SLC23A2Q9UGH3 650 aa22.3■■□□□ 1.16
ACTN1-220ENST00000556433 KLHL3Q9UH77 587 aa22.3■■□□□ 1.16
ACTN1-220ENST00000556433 SPO11Q9Y5K1 396 aa22.3■■□□□ 1.16
ACTN1-220ENST00000556433 AURKAO14965 403 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 CHUKO15111 745 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 KMOO15229 486 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 MTX2O75431 263 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 MC2RQ01718 297 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 NFATC3Q12968 1075 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 PRKD1Q15139 912 aaPredicted RBP22.29■■□□□ 1.16
ACTN1-220ENST00000556433 TAZQ16635 292 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 INSCQ1MX18 579 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 PLA2G4EQ3MJ16 856 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 SPOCD1Q6ZMY3 1216 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 LRRTM4Q86VH4 590 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 CACNA2D3Q8IZS8 1091 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 HTR3CQ8WXA8 447 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 EPB41L1Q9H4G0 881 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 BPIFA1Q9NP55 256 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 SCHIP1Q9P0W5 487 aaPredicted RBP22.29■■□□□ 1.16
ACTN1-220ENST00000556433 ALG6Q9Y672 507 aa22.29■■□□□ 1.16
ACTN1-220ENST00000556433 VEGFDO43915 354 aa22.28■■□□□ 1.16
ACTN1-220ENST00000556433 RAD1O60671 282 aa22.28■■□□□ 1.16
ACTN1-220ENST00000556433 CDK14O94921 469 aa22.28■■□□□ 1.16
ACTN1-220ENST00000556433 FAM87AP0C7U9 286 aa22.28■■□□□ 1.16
ACTN1-220ENST00000556433 PECAM1P16284 738 aaPredicted RBP22.28■■□□□ 1.16
ACTN1-220ENST00000556433 ZNF7P17097 686 aaPredicted RBP22.28■■□□□ 1.16
ACTN1-220ENST00000556433 CD68P34810 354 aaPredicted RBP22.28■■□□□ 1.16
ACTN1-220ENST00000556433 MAGEA1P43355 309 aa22.28■■□□□ 1.16
ACTN1-220ENST00000556433 UBE2IP63279 158 aaKnown RBP22.28■■□□□ 1.16
ACTN1-220ENST00000556433 WASHC5Q12768 1159 aa22.28■■□□□ 1.16
ACTN1-220ENST00000556433 TEFMQ96QE5 360 aaKnown RBP22.28■■□□□ 1.16
ACTN1-220ENST00000556433 CTRCQ99895 268 aa22.28■■□□□ 1.16
ACTN1-220ENST00000556433 SLC12A9Q9BXP2 914 aa22.28■■□□□ 1.16
ACTN1-220ENST00000556433 FAM153AQ9UHL3 310 aa22.28■■□□□ 1.16
ACTN1-220ENST00000556433 DNAJC16Q9Y2G8 782 aa22.28■■□□□ 1.16
ACTN1-220ENST00000556433 LILRA5A6NI73 299 aa22.27■■□□□ 1.16
ACTN1-220ENST00000556433 PSTPIP1O43586 416 aa22.27■■□□□ 1.16
ACTN1-220ENST00000556433 SLC28A2O43868 658 aa22.27■■□□□ 1.16
ACTN1-220ENST00000556433 VIPP01282 170 aa22.27■■□□□ 1.16
ACTN1-220ENST00000556433 LIFP15018 202 aa22.27■■□□□ 1.16
ACTN1-220ENST00000556433 XRCC1P18887 633 aaPredicted RBP22.27■■□□□ 1.16
ACTN1-220ENST00000556433 WNT3AP56704 352 aa22.27■■□□□ 1.16
ACTN1-220ENST00000556433 TBX2Q13207 712 aaPredicted RBP22.27■■□□□ 1.16
ACTN1-220ENST00000556433 PLXDC1Q8IUK5 500 aa22.27■■□□□ 1.16
ACTN1-220ENST00000556433 TRIM48Q8IWZ4 208 aa22.27■■□□□ 1.16
ACTN1-220ENST00000556433 P3H4Q92791 437 aa22.27■■□□□ 1.16
ACTN1-220ENST00000556433 RTP4Q96DX8 246 aa22.27■■□□□ 1.16
ACTN1-220ENST00000556433 FAM117AQ9C073 453 aa22.27■■□□□ 1.16
ACTN1-220ENST00000556433 FBXO8Q9NRD0 319 aa22.27■■□□□ 1.16
ACTN1-220ENST00000556433 PILRAQ9UKJ1 303 aa22.27■■□□□ 1.16
ACTN1-220ENST00000556433 TMPRSS11EQ9UL52 423 aa22.27■■□□□ 1.16
ACTN1-220ENST00000556433 LOC285095A0A1B0GVY8 99 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 PDZK1P1A8MUH7 402 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 MTSS1O43312 755 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms