RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 TBC1D3KA0A087X1G2 549 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 EDDM13A0A1B0GTR0 161 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 A0A1W2PQF6 199 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TBC1D3FA6NER0 549 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 DRGXA6NNA5 263 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 MEI4A8MW99 385 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TBC1D3LB9A6J9 549 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 I6L893 689 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 K7ERQ8 282 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 PLK4O00444 970 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 KPNA3O00505 521 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 NPC1O15118 1278 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 SMAD6O43541 496 aaKnown RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 RAMP2O60895 175 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 ZNF217O75362 1048 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 RNASEH2AO75792 299 aaKnown RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 NEBLO76041 1014 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TOX4O94842 621 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 SEC24DO94855 1032 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 MT-CO1P00395 513 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 CFIP05156 583 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 CYP1A2P05177 515 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 PTMAP06454 111 aaKnown RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TBC1D3HP0C7X1 549 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 GAAP10253 952 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 GOT1P17174 413 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 BCKDHBP21953 392 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 OXTRP30559 389 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 SLC8A1P32418 973 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 ACVRL1P37023 503 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 KIR2DL3P43628 341 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 GPR3P46089 330 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 CDH6P55285 790 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 RPS14P62263 151 aaKnown RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TBX2Q13207 712 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 KLF1Q13351 362 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 EIF4EBP2Q13542 120 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 SPIDRQ14159 915 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 LLGL1Q15334 1064 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 CA9Q16790 459 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 UAP1L1Q3KQV9 507 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 BOLA3Q53S33 107 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TOR2AQ5JU69 321 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TBC1D3GQ6DHY5 549 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TBC1D3CQ6IPX1 549 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 RETSATQ6NUM9 610 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TCTN3Q6NUS6 607 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 SLC36A4Q6YBV0 504 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 SETD3Q86TU7 594 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TMTC1Q8IUR5 882 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 SLC41A1Q8IVJ1 513 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 GLB1L2Q8IW92 636 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TBC1D3Q8IZP1 549 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 HDDC3Q8N4P3 179 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TC2NQ8N9U0 490 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 ZBTB44Q8NCP5 570 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 OR52K2Q8NGK3 314 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 OR2T3Q8NH03 318 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 OR8D1Q8WZ84 308 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 RUBCNQ92622 972 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 CENPIQ92674 756 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 ANP32BQ92688 251 aaKnown RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TTC17Q96AE7 1141 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 CELF6Q96J87 481 aaKnown RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 MRGPRX1Q96LB2 322 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 OR14A2Q96R54 314 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 BAG1Q99933 345 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 NCAPGQ9BPX3 1015 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 SYT11Q9BT88 431 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 MENTQ9BUN1 341 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 SNRNP25Q9BV90 132 aaKnown RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TRIM8Q9BZR9 551 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 CD93Q9NPY3 652 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 ITM2CQ9NQX7 267 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 DYRK4Q9NR20 520 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 KLHL11Q9NVR0 708 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 DNAJC28Q9NX36 388 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 FBXL12Q9NXK8 326 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 TFR2Q9UP52 801 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 HYOU1Q9Y4L1 999 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 PCDHA13Q9Y5I0 950 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 ACTL7AQ9Y615 435 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 EPN1Q9Y6I3 576 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 WDFY4Q6ZS81 3184 aa4.72□□□□□ -1.65
ATXN3-238ENST00000556288 ASCC3Q8N3C0 2202 aaKnown RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 ATXN2Q99700 1313 aaKnown RBP4.72□□□□□ -1.65
ATXN3-238ENST00000556288 ZFHX2Q9C0A1 2572 aaPredicted RBP4.71□□□□□ -1.65
ATXN3-238ENST00000556288 FAM186AA6NE01 2351 aa4.71□□□□□ -1.65
ATXN3-238ENST00000556288 MUC22E2RYF6 1773 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-238ENST00000556288 A0A1W2PRX2 142 aa4.71□□□□□ -1.66
ATXN3-238ENST00000556288 TCRBV5S1A1TA0A578 114 aa4.71□□□□□ -1.66
ATXN3-238ENST00000556288 ILVBLA1L0T0 632 aa4.71□□□□□ -1.66
ATXN3-238ENST00000556288 TARSL2A2RTX5 802 aaKnown RBP4.71□□□□□ -1.66
ATXN3-238ENST00000556288 GOLGA6L3A6NEY3 463 aa4.71□□□□□ -1.66
ATXN3-238ENST00000556288 ARHGAP42A6NI28 874 aa4.71□□□□□ -1.66
ATXN3-238ENST00000556288 PCNX2A6NKB5 2137 aa4.71□□□□□ -1.66
ATXN3-238ENST00000556288 ALG1L2C9J202 215 aa4.71□□□□□ -1.66
ATXN3-238ENST00000556288 RASA4BC9J798 803 aa4.71□□□□□ -1.66
ATXN3-238ENST00000556288 MID1O15344 667 aa4.71□□□□□ -1.66
ATXN3-238ENST00000556288 RASA4O43374 803 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms