RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 HCAR2Q8TDS4 363 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 PATE1Q8WXA2 126 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 C19orf60Q96EN9 201 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 AHCYL2Q96HN2 611 aaKnown RBP6.83□□□□□ -1.32
ATXN3-236ENST00000556220 Q96M66 194 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 ZNF396Q96N95 335 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-236ENST00000556220 NT5C1BQ96P26 610 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 DIRC2Q96SL1 478 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 LGR4Q9BXB1 951 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 GSDMCQ9BYG8 508 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 TWSG1Q9GZX9 223 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 METTL14Q9HCE5 456 aaKnown RBP6.83□□□□□ -1.32
ATXN3-236ENST00000556220 PCDH12Q9NPG4 1184 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 SLAMF7Q9NQ25 335 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 PIGVQ9NUD9 493 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 GPATCH2Q9NW75 528 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 MOSPD1Q9UJG1 213 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 KCND3Q9UK17 655 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 PCDHA7Q9UN72 937 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 MFHAS1Q9Y4C4 1052 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 PCDHGB7Q9Y5F8 929 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 ANKHD1Q8IWZ3 2542 aaKnown RBP6.83□□□□□ -1.32
ATXN3-236ENST00000556220 PRSS38A1L453 326 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 CFAP69A5D8W1 941 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 ANKRD33BA6NCL7 494 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 SLC16A3O15427 465 aaKnown RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 MED7O43513 233 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 LRCH4O75427 683 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 HPXP02790 462 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 FUCA1P04066 466 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 ZSCAN22P10073 491 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 NFKBIAP25963 317 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 AK4P27144 223 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 TPP2P29144 1249 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 ETFBP38117 255 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 CCL11P51671 97 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 GEMIN4P57678 1058 aaKnown RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 ILF3Q12906 894 aaKnown RBP eCLIP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 PDCLQ13371 301 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 PEX6Q13608 980 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 UGP2Q16851 508 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 ZXDCQ2QGD7 858 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 MEI1Q5TIA1 1274 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 OTUD1Q5VV17 481 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 ERAP2Q6P179 960 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 PNCKQ6P2M8 343 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 WDR74Q6RFH5 385 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 C11orf57Q6ZUT1 292 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 RRAGAQ7L523 313 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 SLC47A2Q86VL8 602 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 C1QL4Q86Z23 238 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 CREG2Q8IUH2 290 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 LRRC56Q8IYG6 542 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 WDTC1Q8N5D0 677 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 LMO3Q8TAP4 145 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 ZNF606Q8WXB4 792 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 THAP4Q8WY91 577 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 CCDC47Q96A33 483 aaKnown RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 PGAP3Q96FM1 320 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 GDAP1L1Q96MZ0 367 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 ZYG11BQ9C0D3 744 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 TTYH3Q9C0H2 523 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 TMEM51Q9NW97 253 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 TRNAU1APQ9NX07 287 aaKnown RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 RRN3Q9NYV6 651 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 RCOR3Q9P2K3 495 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 PPARGC1AQ9UBK2 798 aaKnown RBP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 HPCAL4Q9UM19 191 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 CNTN6Q9UQ52 1028 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 ZNF451Q9Y4E5 1061 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 PCDHGA6Q9Y5G7 932 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 NIPBLQ6KC79 2804 aaeCLIP6.82□□□□□ -1.32
ATXN3-236ENST00000556220 FBN3Q75N90 2809 aa6.82□□□□□ -1.32
ATXN3-236ENST00000556220 HEATR9A2RTY3 570 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 A6NCN8 305 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 ANKUB1A6NFN9 424 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 INSIG1O15503 277 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 KRT86O43790 486 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 DPM1O60762 260 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 DAB1O75553 588 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 RECQL5O94762 991 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-236ENST00000556220 LETM1O95202 739 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-236ENST00000556220 IGSF6O95976 241 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 F9P00740 461 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 TMEM253P0C7T8 217 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 ZNF28P17035 718 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 FMO5P49326 533 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 SLC6A3Q01959 620 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 GCNT1Q02742 428 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 TMEM201Q5SNT2 666 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 SLC30A9Q6PML9 568 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 OLFML1Q6UWY5 402 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 LEKR1Q6ZMV7 388 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 FAM183BPQ6ZVS7 135 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 SLC26A9Q7LBE3 791 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 GAS2L3Q86XJ1 694 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 XYLT1Q86Y38 959 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 HPS6Q86YV9 775 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 DRC7Q8IY82 874 aa6.81□□□□□ -1.32
ATXN3-236ENST00000556220 PELI3Q8N2H9 469 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms