RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SEMA3CQ99985 751 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 CORO1BQ9BR76 489 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 PLCD4Q9BRC7 762 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 VPS11Q9H270 941 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 ATXN3LQ9H3M9 355 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 SMOC1Q9H4F8 434 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 SFXN1Q9H9B4 322 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 UGT1A7Q9HAW7 530 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 UGT1A10Q9HAW8 530 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 UGT1A8Q9HAW9 530 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 ZNF334Q9HCZ1 680 aaPredicted RBP6.83□□□□□ -1.32
SLIRP-204ENST00000555890 ATP13A1Q9HD20 1204 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 MLXIPLQ9NP71 852 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 TMEM9BQ9NQ34 198 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 ASAH2Q9NR71 780 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 CHRAC1Q9NRG0 131 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 MKS1Q9NXB0 559 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 SMPD4Q9NXE4 827 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 UBA2Q9UBT2 640 aaPredicted RBP6.83□□□□□ -1.32
SLIRP-204ENST00000555890 REV1Q9UBZ9 1251 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 DCDC2Q9UHG0 476 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 DPP7Q9UHL4 492 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 TRIM33Q9UPN9 1127 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 TBC1D30Q9Y2I9 924 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 TCAF1Q9Y4C2 921 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 PCDHGA5Q9Y5G8 931 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 CPQQ9Y646 472 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 NOTCH4Q99466 2003 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 NBEAL2Q6ZNJ1 2754 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 ANKRD36A6QL64 1941 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 MYLKQ15746 1914 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 CCDC168Q8NDH2 2452 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 A0A0D9SEW6 157 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 ZCWPW2A0A1B0GU75 182 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 LOC285095A0A1B0GVY8 99 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 SLC22A31A6NKX4 558 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 CBX4O00257 560 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 SUSD5O60279 629 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 TBL1XO60907 577 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 RFPL1O75677 317 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 PAPSS2O95340 614 aaPredicted RBP6.82□□□□□ -1.32
SLIRP-204ENST00000555890 CYBBP04839 570 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 MPOP05164 745 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 FGF1P05230 155 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 ITGA2BP08514 1039 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 HNRNPA1P09651 372 aaKnown RBP eCLIP6.82□□□□□ -1.32
SLIRP-204ENST00000555890 MYCLP1P12525 358 aaPredicted RBP6.82□□□□□ -1.32
SLIRP-204ENST00000555890 HLA-DPA1P20036 260 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 TAC1P20366 129 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 NMBRP28336 390 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 TYK2P29597 1187 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 CRHR1P34998 444 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 CCNFP41002 786 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 POLD2P49005 469 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 SERPINB8P50452 374 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 NEK3P51956 506 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 MAXP61244 160 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 CYP4F8P98187 520 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 CDK18Q07002 472 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 THOC5Q13769 683 aaKnown RBP6.82□□□□□ -1.32
SLIRP-204ENST00000555890 BMPR2Q13873 1038 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 ITIH4Q14624 930 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 SLC1A5Q15758 541 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 C21orf62-AS1Q17RA5 79 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 MPPE1Q53F39 396 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 SLC44A4Q53GD3 710 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 HSP90AA5PQ58FG0 334 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 STXBP5Q5T5C0 1151 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 TEDDM1Q5T9Z0 273 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 CDCP2Q5VXM1 449 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 KIAA0930Q6ICG6 404 aaPredicted RBP6.82□□□□□ -1.32
SLIRP-204ENST00000555890 SH2D5Q6ZV89 423 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 GAREM2Q75VX8 874 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 KDELC2Q7Z4H8 507 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 TMC8Q8IU68 726 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 FAM217AQ8IXS0 508 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 LMNTD2Q8IXW0 634 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 UNC5BQ8IZJ1 945 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 CPXM2Q8N436 756 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 CARNMT1Q8N4J0 409 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 TMEM151AQ8N4L1 468 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 SLC25A41Q8N5S1 370 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 MAB21L3Q8N8X9 362 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 ARRDC2Q8TBH0 407 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 CALML6Q8TD86 181 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 GPBAR1Q8TDU6 330 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 TTC9Q92623 222 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 FGF14Q92915 247 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 PRICKLE1Q96MT3 831 aaPredicted RBP6.82□□□□□ -1.32
SLIRP-204ENST00000555890 TSNARE1Q96NA8 513 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 PSKH2Q96QS6 385 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 RBBP8Q99708 897 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 ELAC2Q9BQ52 826 aaKnown RBP6.82□□□□□ -1.32
SLIRP-204ENST00000555890 FAM167BQ9BTA0 163 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 ACE2Q9BYF1 805 aaPredicted RBP6.82□□□□□ -1.32
SLIRP-204ENST00000555890 PITPNM3Q9BZ71 974 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 CAAP1Q9H8G2 361 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 MANSC1Q9H8J5 431 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 PDFQ9HBH1 243 aa6.82□□□□□ -1.32
SLIRP-204ENST00000555890 LTB4R2Q9NPC1 389 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms