RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 FAM96AQ9H5X1 160 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 TAS2R13Q9NYV9 303 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 TBK1Q9UHD2 729 aa11.1□□□□□ -0.63
SHMT2-220ENST00000555634 ZFR2Q9UPR6 939 aaKnown RBP11.1□□□□□ -0.63
SHMT2-220ENST00000555634 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-220ENST00000555634 TRBV5-4A0A0C4DH59 114 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 FAM95CA0A1B0GW59 222 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 RHOBTB1O94844 696 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 MT-ND3P03897 115 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 ATP1B2P14415 290 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-220ENST00000555634 GNSP15586 552 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 STMN1P16949 149 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 RPS3P23396 243 aaKnown RBP eCLIP11.09□□□□□ -0.635e-7■■■□□ 16.6
SHMT2-220ENST00000555634 CD27P26842 260 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 FNTBP49356 437 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 YPEL5P62699 121 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 CDK3Q00526 305 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 POU4F1Q01851 419 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 PDAP1Q13442 181 aaKnown RBP11.09□□□□□ -0.63
SHMT2-220ENST00000555634 USP10Q14694 798 aaKnown RBP11.09□□□□□ -0.63
SHMT2-220ENST00000555634 TEAD4Q15561 434 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 SEPT7Q16181 437 aaKnown RBP11.09□□□□□ -0.63
SHMT2-220ENST00000555634 DBN1Q16643 649 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 WSCD2Q2TBF2 565 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 ZNF528Q3MIS6 628 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 MROH9Q5TGP6 573 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 LRRC8EQ6NSJ5 796 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 ADGRD1Q6QNK2 874 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 KYAT3Q6YP21 454 aaKnown RBP11.09□□□□□ -0.63
SHMT2-220ENST00000555634 RABEPKQ7Z6M1 372 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 ZC3HC1Q86WB0 502 aaKnown RBP11.09□□□□□ -0.63
SHMT2-220ENST00000555634 TRAPPC5Q8IUR0 188 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 IQCKQ8N0W5 287 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 TP53I13Q8NBR0 393 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-220ENST00000555634 DCAKDQ8WVC6 231 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 GAB3Q8WWW8 586 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 LPGAT1Q92604 370 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 BIRC7Q96CA5 298 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 PGM2Q96G03 612 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 SMC6Q96SB8 1091 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 C1QTNF1Q9BXJ1 281 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 C6orf106Q9H6K1 298 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-220ENST00000555634 RMI1Q9H9A7 625 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 CD93Q9NPY3 652 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 C2orf42Q9NWW7 574 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 MARCH4Q9P2E8 410 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-220ENST00000555634 SUSD2Q9UGT4 822 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 LGALS13Q9UHV8 139 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 TRMT6Q9UJA5 497 aaKnown RBP11.09□□□□□ -0.63
SHMT2-220ENST00000555634 TLK1Q9UKI8 766 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 CRYL1Q9Y2S2 319 aa11.09□□□□□ -0.63
SHMT2-220ENST00000555634 A0A1W2PPC4 97 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 AGAP14A8MT82 685 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 FADS2P1A8MWK0 482 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 CXorf49A8MYA2 514 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-220ENST00000555634 PRR33A8MZF0 331 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 PRR5-ARHGAP8B1AHC4 643 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 HMGB1P1B2RPK0 211 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-220ENST00000555634 GAPDHSO14556 408 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-220ENST00000555634 MAP2K7O14733 419 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 UGT1A9O60656 530 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 PKMP14618 531 aaKnown RBP11.08□□□□□ -0.64
SHMT2-220ENST00000555634 UGT1A6P19224 532 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 CHRM3P20309 590 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 SAT1P21673 171 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 UGT1A1P22309 533 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 UGT1A4P22310 534 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 CRABP2P29373 138 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 TYK2P29597 1187 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 UGT1A3P35503 534 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 UGT1A5P35504 534 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 IGFALSP35858 605 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 PLA2G5P39877 138 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 SKIV2L2P42285 1042 aaKnown RBP11.08□□□□□ -0.64
SHMT2-220ENST00000555634 RGS4P49798 205 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 KIAA1024LP59773 190 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 OVGP1Q12889 678 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 INPP5AQ14642 412 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 TMEM31Q5JXX7 168 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 LYSMD4Q5XG99 296 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 KLC3Q6P597 504 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 DOK6Q6PKX4 331 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 TSSK4Q6SA08 328 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 OTOAQ7RTW8 1153 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 TBC1D1Q86TI0 1168 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-220ENST00000555634 DCP2Q8IU60 420 aaKnown RBP11.08□□□□□ -0.64
SHMT2-220ENST00000555634 FAM160A2Q8N612 972 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-220ENST00000555634 KCNJ9Q92806 393 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 WDR92Q96MX6 357 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 GPR22Q99680 433 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 PRRX2Q99811 253 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 DHRS4Q9BTZ2 278 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 MIR1-1HGQ9H1L0 117 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 UGT1A7Q9HAW7 530 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 UGT1A10Q9HAW8 530 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 UGT1A8Q9HAW9 530 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 PLAC1Q9HBJ0 212 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 POPDC3Q9HBV1 291 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 TRIM39Q9HCM9 518 aa11.08□□□□□ -0.64
SHMT2-220ENST00000555634 FZD3Q9NPG1 666 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms