RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 ZNF7P17097 686 aaPredicted RBP10.11□□□□□ -0.79
SRP54-208ENST00000555557 ITGB6P18564 788 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 MAGEA12P43365 314 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 GPR1P46091 355 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 SLC12A2P55011 1212 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 RAB10P61026 200 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 RPS21P63220 83 aaKnown RBP10.11□□□□□ -0.79
SRP54-208ENST00000555557 POU4F1Q01851 419 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 LRRC14Q15048 493 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 WSCD2Q2TBF2 565 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 RNF187Q5TA31 235 aaPredicted RBP10.11□□□□□ -0.79
SRP54-208ENST00000555557 TMEM207Q6UWW9 146 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 TRIM74Q86UV6 250 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 RBFAQ8N0V3 343 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 TCP10LQ8TDR4 215 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 BTN2A2Q8WVV5 523 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 ISL2Q96A47 359 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 LENG8Q96PV6 779 aaPredicted RBP10.11□□□□□ -0.79
SRP54-208ENST00000555557 TTC1Q99614 292 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 COPS8Q99627 209 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 MYOCQ99972 504 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 BTBD1Q9H0C5 482 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 CDH19Q9H159 772 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 P2RY12Q9H244 342 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 CCDC68Q9H2F9 335 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 CHRDQ9H2X0 955 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 FZD3Q9NPG1 666 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 ZDHHC3Q9NYG2 299 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 SLC17A7Q9P2U7 560 aa10.11□□□□□ -0.79
SRP54-208ENST00000555557 CNOT6Q9ULM6 557 aaKnown RBP10.11□□□□□ -0.79
SRP54-208ENST00000555557 SLC31A1O15431 190 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 SLC25A14O95258 325 aaPredicted RBP10.1□□□□□ -0.79
SRP54-208ENST00000555557 CHN1P15882 459 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 CHRM3P20309 590 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 AKT1P31749 480 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 PPARGP37231 505 aaPredicted RBP10.1□□□□□ -0.79
SRP54-208ENST00000555557 CSRP3P50461 194 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 SGCGQ13326 291 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 ZKSCAN8Q15776 578 aaPredicted RBP10.1□□□□□ -0.79
SRP54-208ENST00000555557 LYPLAL1Q5VWZ2 237 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 FAM45BPQ6NSW5 357 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 C16orf46Q6P387 395 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 NAPRTQ6XQN6 538 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 HORMAD1Q86X24 394 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 SPEM1Q8N4L4 309 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 FAM160A2Q8N612 972 aaPredicted RBP10.1□□□□□ -0.79
SRP54-208ENST00000555557 FAM45AQ8TCE6 357 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 LKAAEAR1Q8TD35 194 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 SCG3Q8WXD2 468 aaKnown RBP10.1□□□□□ -0.79
SRP54-208ENST00000555557 GLYATL1Q969I3 302 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 ULK4Q96C45 1275 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 SGF29Q96ES7 293 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 SLC30A3Q99726 388 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 C1QTNF2Q9BXJ5 285 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 SLC17A9Q9BYT1 436 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 CLPBQ9H078 707 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 SARS2Q9NP81 518 aaKnown RBP10.1□□□□□ -0.79
SRP54-208ENST00000555557 USP36Q9P275 1121 aaKnown RBP10.1□□□□□ -0.79
SRP54-208ENST00000555557 NFKBIL1Q9UBC1 381 aaPredicted RBP10.1□□□□□ -0.79
SRP54-208ENST00000555557 TLK1Q9UKI8 766 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 VPS9D1Q9Y2B5 631 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 TRPM6Q9BX84 2022 aa10.1□□□□□ -0.79
SRP54-208ENST00000555557 RAD51BO15315 384 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 PRPF4O43172 522 aaKnown RBP eCLIP10.09□□□□□ -0.79
SRP54-208ENST00000555557 TRIM16O95361 564 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 ESR1P03372 595 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 FDXRP22570 491 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 CCNFP41002 786 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 CCT5P48643 541 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 POLD2P49005 469 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 ADARP55265 1226 aaKnown RBP10.09□□□□□ -0.79
SRP54-208ENST00000555557 IRX4P78413 519 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 DPTQ07507 201 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 DLG1Q12959 904 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 TMEM259Q4ZIN3 620 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 PTRHD1Q6GMV3 140 aaKnown RBP10.09□□□□□ -0.79
SRP54-208ENST00000555557 PNCKQ6P2M8 343 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 ZNF765Q7L2R6 523 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 RAVER1Q8IY67 606 aaKnown RBP10.09□□□□□ -0.79
SRP54-208ENST00000555557 SIDT2Q8NBJ9 832 aaKnown RBP10.09□□□□□ -0.79
SRP54-208ENST00000555557 DTX3LQ8TDB6 740 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 ACMSDQ8TDX5 336 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 KCTD4Q8WVF5 259 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 ANKRD49Q8WVL7 239 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 ALKBH8Q96BT7 664 aaKnown RBP10.09□□□□□ -0.79
SRP54-208ENST00000555557 APOPT1Q96IL0 206 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 GPR21Q99679 349 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 PAIP2Q9BPZ3 127 aaKnown RBP10.09□□□□□ -0.79
SRP54-208ENST00000555557 LGR4Q9BXB1 951 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 GPAMQ9HCL2 828 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 PREBQ9HCU5 417 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 SMOXQ9NWM0 555 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 SMG5Q9UPR3 1016 aaKnown RBP10.09□□□□□ -0.79
SRP54-208ENST00000555557 INVSQ9Y283 1065 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 OAS3Q9Y6K5 1087 aaKnown RBP10.09□□□□□ -0.79
SRP54-208ENST00000555557 DOCK9Q9BZ29 2069 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 LRRK1Q38SD2 2015 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 IGLV3-16A0A075B6K0 115 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 OR2AG2A6NM03 316 aa10.09□□□□□ -0.79
SRP54-208ENST00000555557 E5RI56 91 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms