RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 MC4RP32245 332 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 CAP2P40123 477 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ASMTP46597 345 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SMAD3P84022 425 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SULT2A1Q06520 285 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 NOMO2Q5JPE7 1267 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 B3GNT6Q6ZMB0 384 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 RELL1Q8IUW5 271 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 IGDCC4Q8TDY8 1250 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ASB2Q96Q27 587 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 MRPL45Q9BRJ2 306 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 IL22Q9GZX6 179 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 DPEP2Q9H4A9 486 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 TBC1D17Q9HA65 648 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 MLXQ9UH92 298 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 DNPEPQ9ULA0 475 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 AP1M2Q9Y6Q5 423 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 LRIG2O94898 1065 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 FGBP02675 491 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 BNIP1Q12981 228 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 WASHC2DQ5SRD0 308 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 RALGPS2Q86X27 583 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF565Q8N9K5 539 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 APOLD1Q96LR9 279 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 HEPHQ9BQS7 1158 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 OR51V1Q9H2C8 321 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 CD84Q9UIB8 345 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 HES2Q9Y543 173 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 PCDHB11Q9Y5F2 797 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 PCDHGC5Q9Y5F6 944 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 ARL5AQ9Y689 179 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 BTBD19C9JJ37 291 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 ALDH4A1P30038 563 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 CDH5P33151 784 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 CDKN1CP49918 316 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 MCL1Q07820 350 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 LCN1P1Q5VSP4 162 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 KYAT3Q6YP21 454 aaKnown RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF571Q7Z3V5 609 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 ARNTL2Q8WYA1 636 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF75CPQ92670 426 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 BAIAP2Q9UQB8 552 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 PLEKHA6Q9Y2H5 1048 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 HECW2Q9P2P5 1572 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 SPHKAPQ2M3C7 1700 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 KCNJ13O60928 360 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 CPNE3O75131 537 aaKnown RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 VNN2O95498 520 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 LGALS2P05162 132 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 PTX3P26022 381 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 DPYSQ14117 519 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 IDNKQ5T6J7 187 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 ADNP2Q6IQ32 1131 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 TMEM86AQ8N2M4 240 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 LSM14AQ8ND56 463 aaKnown RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 MFSD3Q96ES6 412 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 TTC37Q6PGP7 1564 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 A0A0J9YVX5 310 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 KHNYNO15037 678 aaKnown RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 ALADP13716 330 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 LPOP22079 712 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 SPATC1Q76KD6 591 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 OR8H3Q8N146 312 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 ZSCAN4Q8NAM6 433 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 TRMT10AQ8TBZ6 339 aaKnown RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 P2RX7Q99572 595 aaKnown RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 SPATA7Q9P0W8 599 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 E7EQ34 232 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 PGRP06401 933 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 ASGR1P07306 291 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 COX4I1P13073 169 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 MTHFRP42898 656 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 MAPK8P45983 427 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 OR3A3P47888 321 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 OR3A2P47893 321 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 AP3S2P59780 193 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 HERVK_113P62684 666 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 MTX3Q5HYI7 312 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 KATNAL2Q8IYT4 538 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 B4DGG1 531 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 MSI1O43347 362 aaKnown RBP6.84□□□□□ -1.31
SYNE2-216ENST00000555002 CCNOP22674 350 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 PAX7P23759 505 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 CDH11P55287 796 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 USP4Q13107 963 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 GRB10Q13322 594 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 INAVAQ3KP66 663 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 RUNDC3AQ59EK9 446 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 USP49Q70CQ1 688 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 FAM35AQ86V20 835 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 RIOX2Q8IUF8 465 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 FBXW8Q8N3Y1 598 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 PIK3C3Q8NEB9 887 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 B3GALT6Q96L58 329 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 DMRTB1Q96MA1 342 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 KCNIP3Q9Y2W7 256 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 KCNE2Q9Y6J6 123 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 U3KQV3 271 aa6.84□□□□□ -1.31
SYNE2-216ENST00000555002 COL6A1P12109 1028 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms