RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 PHYKPLQ8IUZ5 450 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 ARL10Q8N8L6 244 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 RASGEF1AQ8N9B8 481 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 DNAAF3Q8N9W5 541 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 GPR156Q8NFN8 814 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 IFI44Q8TCB0 444 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 ZNF398Q8TD17 642 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 CPT1BQ92523 772 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 HOMER3Q9NSC5 361 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 FEZ2Q9UHY8 353 aaPredicted RBP12.21□□□□□ -0.45
SYNE2-214ENST00000554928 SAR1BQ9Y6B6 198 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 TRBV23OR9-2A0A075B6M9 112 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 CTAGE9A4FU28 777 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 EME2A4GXA9 379 aaPredicted RBP12.2□□□□□ -0.46
SYNE2-214ENST00000554928 ERI2A8K979 691 aaKnown RBP12.2□□□□□ -0.46
SYNE2-214ENST00000554928 CHUKO15111 745 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 SGTAO43765 313 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 MC4RP32245 332 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 MRPS25P82663 173 aaKnown RBP12.2□□□□□ -0.46
SYNE2-214ENST00000554928 INSM1Q01101 510 aaPredicted RBP12.2□□□□□ -0.46
SYNE2-214ENST00000554928 TMEM115Q12893 351 aaPredicted RBP12.2□□□□□ -0.46
SYNE2-214ENST00000554928 ILF3Q12906 894 aaKnown RBP eCLIP12.2□□□□□ -0.46
SYNE2-214ENST00000554928 HLTFQ14527 1009 aaKnown RBP eCLIP12.2□□□□□ -0.46
SYNE2-214ENST00000554928 HS1BP3Q53T59 392 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 LVRNQ6Q4G3 990 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 XKR5Q6UX68 686 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 SYT10Q6XYQ8 523 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 DET1Q7L5Y6 550 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 C11orf96Q7Z7L8 435 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 LINC00523Q86TU6 105 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 PIANPQ8IYJ0 282 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 NAGSQ8N159 534 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 DDHD1Q8NEL9 900 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 OR13J1Q8NGT2 312 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 GDAP1Q8TB36 358 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 DTX3LQ8TDB6 740 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 ZDHHC1Q8WTX9 485 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 CCDC74AQ96AQ1 378 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 CDKN2AIPNLQ96HQ2 116 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 NAP1L3Q99457 506 aaPredicted RBP12.2□□□□□ -0.46
SYNE2-214ENST00000554928 TRIM56Q9BRZ2 755 aaKnown RBP12.2□□□□□ -0.46
SYNE2-214ENST00000554928 GSDMCQ9BYG8 508 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 DPEP2Q9H4A9 486 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 ASB8Q9H765 288 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 EIF2B3Q9NR50 452 aaKnown RBP12.2□□□□□ -0.46
SYNE2-214ENST00000554928 NLE1Q9NVX2 485 aaPredicted RBP12.2□□□□□ -0.46
SYNE2-214ENST00000554928 TBC1D29Q9UFV1 150 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 PADI4Q9UM07 663 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 PCDHGA1Q9Y5H4 931 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 RNF215Q9Y6U7 377 aa12.2□□□□□ -0.46
SYNE2-214ENST00000554928 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.19□□□□□ -0.46
SYNE2-214ENST00000554928 CCDC162PA2VCL2 907 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 PRR19A6NJB7 356 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 OR2AG2A6NM03 316 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 AGAP14A8MT82 685 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 AVILO75366 819 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 CDK14O94921 469 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 ECEL1O95672 775 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 TPSB2P20231 275 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 PSMA3P25788 255 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 MGAT1P26572 445 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 MAGEA6P43360 314 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 FNTAP49354 379 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 ETF1P62495 437 aaKnown RBP12.19□□□□□ -0.46
SYNE2-214ENST00000554928 SHC2P98077 582 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 NFATC2Q13469 925 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 TPSAB1Q15661 275 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 SMAD1Q15797 465 aaKnown RBP12.19□□□□□ -0.46
SYNE2-214ENST00000554928 C14orf28Q4W4Y0 310 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 TSTD2Q5T7W7 516 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 HES3Q5TGS1 186 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 ZDHHC20Q5W0Z9 365 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 CES3Q6UWW8 571 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 TMPRSS7Q7RTY8 843 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 CAND1Q86VP6 1230 aaKnown RBP12.19□□□□□ -0.46
SYNE2-214ENST00000554928 C17orf82Q86X59 251 aaPredicted RBP12.19□□□□□ -0.46
SYNE2-214ENST00000554928 KLHL7Q8IXQ5 586 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 AGGF1Q8N302 714 aaeCLIP12.19□□□□□ -0.46
SYNE2-214ENST00000554928 MPP5Q8N3R9 675 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 EFCAB3Q8N7B9 438 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 BEND7Q8N7W2 519 aaPredicted RBP12.19□□□□□ -0.46
SYNE2-214ENST00000554928 STYXQ8WUJ0 223 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 CHRAC1Q9NRG0 131 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 SMOXQ9NWM0 555 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 SYBUQ9NX95 663 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 SCHIP1Q9P0W5 487 aaPredicted RBP12.19□□□□□ -0.46
SYNE2-214ENST00000554928 DNAJC16Q9Y2G8 782 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 TCAF1Q9Y4C2 921 aa12.19□□□□□ -0.46
SYNE2-214ENST00000554928 GOLGA4Q13439 2230 aaKnown RBP12.19□□□□□ -0.46
SYNE2-214ENST00000554928 ASXL3Q9C0F0 2248 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 PLXNB3Q9ULL4 1909 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 TRBV5-4A0A0C4DH59 114 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 PRAMEF33A0A0G2JMD5 474 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 A6NCN8 305 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 GOLGA8MH3BSY2 632 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 OPA1O60313 960 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 SNX2O60749 519 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 PPFIA2O75334 1257 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 TRIM16O95361 564 aa12.18□□□□□ -0.46
SYNE2-214ENST00000554928 FOXN2P32314 431 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms