RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 LYSMD3Q7Z3D4 306 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 MYLIPQ8WY64 445 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 SLC46A2Q9BY10 475 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 TRIM54Q9BYV2 358 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 LINC00597Q9H2U6 94 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 TCF7L2Q9NQB0 619 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 THG1LQ9NWX6 298 aaKnown RBP16.46■□□□□ 0.23
PCNX1-209ENST00000554879 BIRC5O15392 142 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 IL1BP01584 269 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 TYRP14679 529 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 MPSTP25325 297 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 TTPAP49638 278 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 LMAN2Q12907 356 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 ACOX1Q15067 660 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 NRF1Q16656 503 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 NAPRTQ6XQN6 538 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 ASRGL1Q7L266 308 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 TMEM25Q86YD3 366 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 TMPRSS6Q8IU80 811 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 VPS50Q96JG6 964 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 GPR21Q99679 349 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 MCOLN1Q9GZU1 580 aa16.46■□□□□ 0.22
PCNX1-209ENST00000554879 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.45■□□□□ 0.22
PCNX1-209ENST00000554879 HIST1H2AGP0C0S8 130 aaPredicted RBP16.45■□□□□ 0.22
PCNX1-209ENST00000554879 PSMC3P17980 439 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 UGT1A6P19224 532 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 HIST1H2ADP20671 130 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 UGT1A1P22309 533 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 UGT1A4P22310 534 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 UGT1A3P35503 534 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 UGT1A5P35504 534 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 CCNG1P51959 295 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 HSPA14Q0VDF9 509 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 TRAF2Q12933 501 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 RGS21Q2M5E4 152 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 ZNF284Q2VY69 593 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 UGT3A1Q6NUS8 523 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 DHDDSQ86SQ9 333 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 SORCS1Q8WY21 1168 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 HIST1H2AHQ96KK5 128 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 HIST1H2AJQ99878 128 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 H2AFJQ9BTM1 129 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 GATA5Q9BWX5 397 aaPredicted RBP16.45■□□□□ 0.22
PCNX1-209ENST00000554879 TAS2R1Q9NYW7 299 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 PPM1HQ9ULR3 514 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 ITM2AO43736 263 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 PRSS56P0CW18 603 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 PABPC1P11940 636 aaKnown RBP16.45■□□□□ 0.22
PCNX1-209ENST00000554879 IL2P60568 153 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 PLEKHG6Q3KR16 790 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 STEAP4Q687X5 459 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 KBTBD2Q8IY47 623 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 DENND1AQ8TEH3 1009 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 ACDQ96AP0 544 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 CCDC126Q96EE4 140 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 SEMA4BQ9NPR2 832 aaPredicted RBP16.45■□□□□ 0.22
PCNX1-209ENST00000554879 WWOXQ9NZC7 414 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 SLCO3A1Q9UIG8 710 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 ATP6AP2A0A1C7CYW4 349 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 DRGXA6NNA5 263 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 J3QRK9 145 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 MUSKO15146 869 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 ATP6AP2O75787 350 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 PRAMEF1O95521 474 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 ENO2P09104 434 aaPredicted RBP16.45■□□□□ 0.22
PCNX1-209ENST00000554879 ATP5F1P24539 256 aaPredicted RBP16.45■□□□□ 0.22
PCNX1-209ENST00000554879 EPHA3P29320 983 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 PRKAA1Q13131 559 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 MYO1HQ8N1T3 1032 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 GATA6Q92908 595 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 FBXL8Q96CD0 374 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 MRPL57Q9BQC6 102 aaKnown RBP16.45■□□□□ 0.22
PCNX1-209ENST00000554879 WDR55Q9H6Y2 383 aaPredicted RBP16.45■□□□□ 0.22
PCNX1-209ENST00000554879 MID1IP1Q9NPA3 183 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 SAR1AQ9NR31 198 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 MARCH4Q9P2E8 410 aaPredicted RBP16.45■□□□□ 0.22
PCNX1-209ENST00000554879 DMTF1Q9Y222 760 aa16.45■□□□□ 0.22
PCNX1-209ENST00000554879 KIAA0355O15063 1070 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 KATNA1O75449 491 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 KLHL2O95198 593 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 CD70P32970 193 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 IRS1P35568 1242 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 MAPK8P45983 427 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 POLR2LP62875 67 aaKnown RBP16.44■□□□□ 0.22
PCNX1-209ENST00000554879 RFTN1Q14699 578 aaPredicted RBP16.44■□□□□ 0.22
PCNX1-209ENST00000554879 DUS1LQ6P1R4 473 aaKnown RBP16.44■□□□□ 0.22
PCNX1-209ENST00000554879 MRPL43Q8N983 215 aaKnown RBP16.44■□□□□ 0.22
PCNX1-209ENST00000554879 TUBGCP3Q96CW5 907 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 ZFRQ96KR1 1074 aaKnown RBP16.44■□□□□ 0.22
PCNX1-209ENST00000554879 PRICKLE1Q96MT3 831 aaPredicted RBP16.44■□□□□ 0.22
PCNX1-209ENST00000554879 KLHL32Q96NJ5 620 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 ADA2Q9NZK5 511 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 SOX11P35716 441 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 UBAP2LQ14157 1087 aaKnown RBP16.44■□□□□ 0.22
PCNX1-209ENST00000554879 LIPMQ5VYY2 423 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 FBXL19Q6PCT2 694 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 KIAA0408Q6ZU52 694 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 FNDC8Q8TC99 324 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 NMUR2Q9GZQ4 415 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 CCDC134Q9H6E4 229 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms