RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 BAG1Q99933 345 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 KXD1Q9BQD3 176 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 KIFC3Q9BVG8 833 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 TM6SF1Q9BZW5 370 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 SPRY4Q9C004 299 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 OR10A4Q9H209 315 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 IL25Q9H293 177 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 GOLPH3LQ9H4A5 285 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 EPB41L5Q9HCM4 733 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 CNGB3Q9NQW8 809 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 MORF4L1Q9UBU8 362 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 CFDP1Q9UEE9 299 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 TINAGQ9UJW2 476 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 TTC7AQ9ULT0 858 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 PROCRQ9UNN8 238 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 PPIEQ9UNP9 301 aaKnown RBP3.1□□□□□ -1.91
SCFD1-213ENST00000554776 B3GALT5Q9Y2C3 310 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 PCDHGA5Q9Y5G8 931 aa3.1□□□□□ -1.91
SCFD1-213ENST00000554776 A6NL46 340 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 PRSS44E7EML9 344 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 H7C0S8 307 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 SOCS6O14544 535 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 NDUFS7O75251 213 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 TBX10O75333 385 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 TADA2AO75478 443 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 SERPINI2O75830 405 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 RSL1D1O76021 490 aaKnown RBP3.09□□□□□ -1.91
SCFD1-213ENST00000554776 HIST1H2ABP04908 130 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 GLULP15104 373 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 HIST1H2ADP20671 130 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 DNASE1P24855 282 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 BDKRB2P30411 391 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 SSTR2P30874 369 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 HOXA13P31271 388 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-213ENST00000554776 CAPZA2P47755 286 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 ART1P52961 327 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 PNLIPRP2P54317 469 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 MRPS34P82930 218 aaKnown RBP3.09□□□□□ -1.91
SCFD1-213ENST00000554776 SPOCK1Q08629 439 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 GRIK2Q13002 908 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 CAMK2DQ13557 499 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 DHX34Q14147 1143 aaKnown RBP3.09□□□□□ -1.91
SCFD1-213ENST00000554776 HLFQ16534 295 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 SOWAHCQ53LP3 525 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-213ENST00000554776 ERMARDQ5T6L9 678 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 C6orf163Q5TEZ5 329 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 METTL2BQ6P1Q9 378 aaKnown RBP3.09□□□□□ -1.91
SCFD1-213ENST00000554776 HIST3H2AQ7L7L0 130 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 KRT74Q7RTS7 529 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 ADGRA1Q86SQ6 560 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 TSPAN33Q86UF1 283 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 CCDC190Q86UF4 302 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 DCP1BQ8IZD4 617 aaKnown RBP3.09□□□□□ -1.91
SCFD1-213ENST00000554776 BEST3Q8N1M1 668 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 RASGEF1CQ8N431 466 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 POGLUT1Q8NBL1 392 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 SMRP1Q8NCR6 262 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 OR6J1Q8NGC5 347 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 OR1J2Q8NGS2 313 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 GSDMBQ8TAX9 411 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 ZFAND2BQ8WV99 257 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 TMED6Q8WW62 240 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 VPS33AQ96AX1 596 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 METTL2AQ96IZ6 378 aaKnown RBP3.09□□□□□ -1.91
SCFD1-213ENST00000554776 CEP295NLQ96MC4 621 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 NUDCD1Q96RS6 583 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 FIZ1Q96SL8 496 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 DDOQ99489 341 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 CCDC106Q9BWC9 280 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 KRTAP2-2Q9BYT5 123 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 OSGEPL1Q9H4B0 414 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 C6orf106Q9H6K1 298 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-213ENST00000554776 SLC35C2Q9NQQ7 365 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 TAS2R14Q9NYV8 317 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 BCCIPQ9P287 314 aaKnown RBP eCLIP3.09□□□□□ -1.91
SCFD1-213ENST00000554776 FBXW11Q9UKB1 542 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 ZHX1Q9UKY1 873 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-213ENST00000554776 PAM16Q9Y3D7 125 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 CNTNAP2Q9UHC6 1331 aa3.09□□□□□ -1.91
SCFD1-213ENST00000554776 LOC102723996A0A087X1L8 192 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 LNP1A1A4G5 178 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 HSPA4LO95757 839 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 AFPP02771 609 aaKnown RBP3.08□□□□□ -1.92
SCFD1-213ENST00000554776 ABCB1P08183 1280 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-213ENST00000554776 IGHV4-30-4P0DP06 118 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 ACTN1P12814 892 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 UBA1P22314 1058 aaKnown RBP3.08□□□□□ -1.92
SCFD1-213ENST00000554776 NMBRP28336 390 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 STX2P32856 288 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 MATR3P43243 847 aaKnown RBP eCLIP3.08□□□□□ -1.922e-6■■□□□ 14.4
SCFD1-213ENST00000554776 MMP14P50281 582 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 TERF1P54274 439 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 BRWD1-AS2P59051 145 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 ZBED6P86452 979 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 DDR1Q08345 913 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 SREBF2Q12772 1141 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 KRT33BQ14525 404 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 KYNUQ16719 465 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 LETM2Q2VYF4 491 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 MYLK3Q32MK0 819 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms