RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 HPS6Q86YV9 775 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 TMC8Q8IU68 726 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ATP6V0D2Q8N8Y2 350 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SLC22A17Q8WUG5 538 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 PIH1D2Q8WWB5 315 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ACSF2Q96CM8 615 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 MYEOVQ96EZ4 313 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CENPNQ96H22 339 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF583Q96ND8 569 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 WDFY2Q96P53 400 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SERPINI1Q99574 410 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 LPIN3Q9BQK8 851 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 UGT2B28Q9BY64 529 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ULBP1Q9BZM6 244 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CEP44Q9C0F1 390 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 WDR41Q9HAD4 459 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 EFCAB1Q9HAE3 211 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 EML4Q9HC35 981 aaKnown RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 NDFIP2Q9NV92 336 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.42□□□□□ -1.865e-8■□□□□ 11.1
SEC23A-207ENST00000554615 SLC17A6Q9P2U8 582 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 MTRRQ9UBK8 725 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 POLG2Q9UHN1 485 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SCOCQ9UIL1 159 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 BTRCQ9Y297 605 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 PADI2Q9Y2J8 665 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 TMED5Q9Y3A6 229 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 PMF1-BGLAPU3KQ54 211 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 E7ENX8 843 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 GCM2O75603 506 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF682O95780 498 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 VTNP04004 478 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SNRPB2P08579 225 aaKnown RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CD19P15391 556 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 RAG1P15918 1043 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SELPP16109 830 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 GPX2P18283 190 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CRHBPP24387 322 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 PCSK6P29122 969 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 HOXA9P31269 272 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 GJC1P36383 396 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SCNN1BP51168 640 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CDH4P55283 916 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 TAS2R39P59534 338 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 PSME3P61289 254 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 RPL10AP62906 217 aaKnown RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 TFAMQ00059 246 aaKnown RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 OVGP1Q12889 678 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 IKQ13123 557 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 STX5Q13190 355 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 OXA1LQ15070 435 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 FSCN1Q16658 493 aaKnown RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 BBS9Q3SYG4 887 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 PYCR3Q53H96 274 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CERCAMQ5T4B2 595 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 TMTC4Q5T4D3 741 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 LPCAT4Q643R3 524 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SDE2Q6IQ49 451 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SHQ1Q6PI26 577 aaKnown RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 C1orf228Q6PIY5 440 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 PRR23CQ6ZRP0 262 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 DNM1P46Q6ZS02 220 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 TRIM67Q6ZTA4 783 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ASPGQ86U10 573 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CUZD1Q86UP6 607 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ZC3H7AQ8IWR0 971 aaKnown RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 MDGA1Q8NFP4 955 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 OR8J2Q8NGG1 315 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 NTNG2Q96CW9 530 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SCARF2Q96GP6 870 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ZFP91Q96JP5 570 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CLPTM1LQ96KA5 538 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 C7orf34Q96L11 122 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 EPYCQ99645 322 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 EPAS1Q99814 870 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CENPKQ9BS16 269 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CRISPLD2Q9H0B8 497 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 EHD1Q9H4M9 534 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 OCEL1Q9H607 264 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 BRF2Q9HAW0 419 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SLC25A19Q9HC21 320 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CHRAC1Q9NRG0 131 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 DCAF13Q9NV06 445 aaKnown RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CD274Q9NZQ7 290 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CCDC59Q9P031 241 aaKnown RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 BCCIPQ9P287 314 aaKnown RBP eCLIP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 LIMD1Q9UGP4 676 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 BAIAP2L1Q9UHR4 511 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ENPP5Q9UJA9 477 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CLEC11AQ9Y240 323 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 NTNG1Q9Y2I2 539 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 DHRS7Q9Y394 339 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 EML5Q05BV3 1969 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 A0A096LPI6 279 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 MYBPHLA2RUH7 354 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PLOD2O00469 737 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 WNT9AO14904 365 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 NUAK1O60285 661 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PEX10O60683 326 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 UGT2B11O75310 529 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms