RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 CABIN1Q9Y6J0 2220 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 MYO18BQ8IUG5 2567 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 KNL1Q8NG31 2342 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 TBC1D3DA0A087WVF3 549 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 TBC1D3IA0A087WXS9 549 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 TBC1D3EA0A087X179 549 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 TBC1D3KA0A087X1G2 549 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 TCRBV7S2A1N4TA0A589 114 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 TARSL2A2RTX5 802 aaKnown RBP4.99□□□□□ -1.61
ATXN3-228ENST00000554592 TBC1D3FA6NER0 549 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-228ENST00000554592 TBC1D3LB9A6J9 549 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 NPIPB8E9PQR5 432 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 H3BQV1 296 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 MID1O15344 667 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 STX6O43752 255 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 RPN1P04843 607 aaKnown RBP4.99□□□□□ -1.61
ATXN3-228ENST00000554592 CD1AP06126 327 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 TBC1D3HP0C7X1 549 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 MYF5P13349 255 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 ITGB6P18564 788 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 HOXD9P28356 352 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-228ENST00000554592 ADORA2BP29275 332 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 NDST1P52848 882 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 CYP24A1Q07973 514 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 CST6Q15828 149 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 ISXQ2M1V0 245 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 SGSM1Q2NKQ1 1148 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 ZNF699Q32M78 642 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 HNRNPA1L2Q32P51 320 aaKnown RBP4.99□□□□□ -1.61
ATXN3-228ENST00000554592 LINC00303Q3SY05 128 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 FKBP15Q5T1M5 1219 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 TBC1D3GQ6DHY5 549 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 TBC1D3CQ6IPX1 549 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 NAPEPLDQ6IQ20 393 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 CLEC20AQ6ZU45 233 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 SEM1Q6ZVN7 128 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 RSRC2Q7L4I2 434 aaKnown RBP4.99□□□□□ -1.61
ATXN3-228ENST00000554592 GPRIN1Q7Z2K8 1008 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 C11orf96Q7Z7L8 435 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 XYLT1Q86Y38 959 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 MMAAQ8IVH4 418 aaKnown RBP4.99□□□□□ -1.61
ATXN3-228ENST00000554592 CCDC65Q8IXS2 484 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 TBC1D3Q8IZP1 549 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-228ENST00000554592 ARL14Q8N4G2 192 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 ZNF557Q8N988 423 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-228ENST00000554592 C12orf29Q8N999 325 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 KDM1BQ8NB78 822 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 XXYLT1Q8NBI6 393 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 IL17RDQ8NFM7 739 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 OR4C6Q8NH72 309 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 EPSTI1Q96J88 318 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 CCNL2Q96S94 520 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-228ENST00000554592 DUSP16Q9BY84 665 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 FGFBP2Q9BYJ0 223 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 UBXN6Q9BZV1 441 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 DNAI2Q9GZS0 605 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 SDCBP2Q9H190 292 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 SMYD3Q9H7B4 428 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 ABCB8Q9NUT2 735 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 KLHL11Q9NVR0 708 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 AURKAIP1Q9NWT8 199 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-228ENST00000554592 SERGEFQ9UGK8 458 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 GGA2Q9UJY4 613 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 STOML2Q9UJZ1 356 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 DMTF1Q9Y222 760 aa4.99□□□□□ -1.61
ATXN3-228ENST00000554592 HELZP42694 1942 aaKnown RBP4.99□□□□□ -1.61
ATXN3-228ENST00000554592 MYO18AQ92614 2054 aaKnown RBP4.98□□□□□ -1.61
ATXN3-228ENST00000554592 COL6A6A6NMZ7 2263 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 KIAA1549LQ6ZVL6 1849 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 A0A1B0GVM2 712 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 A0A1W2PPL8 197 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 NEMP2A6NFY4 417 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 PRSS29PA6NIE9 313 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 CDRT15L2A8MXV6 281 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 PRAMEF26H0Y7S4 382 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 CYR61O00622 381 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 PJA2O43164 708 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 PHGDHO43175 533 aaKnown RBP4.98□□□□□ -1.61
ATXN3-228ENST00000554592 TGFB1I1O43294 461 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 FRS3O43559 492 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 LATO43561 262 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 SDC3O75056 442 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 LATS1O95835 1130 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 AHSGP02765 367 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 ALPPL2P10696 532 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 KITP10721 976 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 DGKAP23743 735 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 SLC6A4P31645 630 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 HOXD13P35453 343 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 GDF5P43026 501 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 SLC25A3Q00325 362 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 BIRC3Q13489 604 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 POLD3Q15054 466 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-228ENST00000554592 BRD3Q15059 726 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 ELAVL1Q15717 326 aaKnown RBP4.98□□□□□ -1.61
ATXN3-228ENST00000554592 ZSCAN23Q3MJ62 389 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 KHDC1LQ5JSQ8 128 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 MPP7Q5T2T1 576 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 C9orf64Q5T6V5 341 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 ZNF529Q6P280 563 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms