RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 TLX3O43711 291 aaPredicted RBP7.44□□□□□ -1.22
LINC00640-201ENST00000554409 VEGFDO43915 354 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 ECEL1O95672 775 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 SLC4A1P02730 911 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 RPLP0P05388 317 aaKnown RBP7.44□□□□□ -1.22
LINC00640-201ENST00000554409 CCDC175P0C221 793 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 SLC2A4P14672 509 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 ZNF8P17098 575 aaPredicted RBP7.44□□□□□ -1.22
LINC00640-201ENST00000554409 SPAM1P38567 509 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 FASLGP48023 281 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 MAZP56270 477 aaKnown RBP7.44□□□□□ -1.22
LINC00640-201ENST00000554409 ERVPABLB-1P60509 514 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 GABREP78334 506 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 CCZ1BP86790 482 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 CCZ1P86791 482 aaPredicted RBP7.44□□□□□ -1.22
LINC00640-201ENST00000554409 EIF3IQ13347 325 aaKnown RBP7.44□□□□□ -1.22
LINC00640-201ENST00000554409 MSLNQ13421 630 aaPredicted RBP7.44□□□□□ -1.22
LINC00640-201ENST00000554409 SQSTM1Q13501 440 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 PRPSAP1Q14558 356 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 TAF1AQ15573 450 aaPredicted RBP7.44□□□□□ -1.22
LINC00640-201ENST00000554409 SEL1L2Q5TEA6 688 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 MEI1Q5TIA1 1274 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 CHST15Q7LFX5 561 aaPredicted RBP7.44□□□□□ -1.22
LINC00640-201ENST00000554409 ADGRG6Q86SQ4 1221 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 RETREG3Q86VR2 466 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 SFRP1Q8N474 314 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 SLC25A41Q8N5S1 370 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 WDR36Q8NI36 951 aaKnown RBP7.44□□□□□ -1.22
LINC00640-201ENST00000554409 SLC35B2Q8TB61 432 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 BLOC1S5Q8TDH9 187 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 RTP4Q96DX8 246 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 ATXN7L3BQ96GX2 97 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 PRR11Q96HE9 360 aaPredicted RBP7.44□□□□□ -1.22
LINC00640-201ENST00000554409 TMEM74Q96NL1 305 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 FAM118BQ9BPY3 351 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 FICDQ9BVA6 458 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 FRMD8P1Q9BZ68 369 aaPredicted RBP7.44□□□□□ -1.22
LINC00640-201ENST00000554409 STRADBQ9C0K7 418 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 OR2AG1Q9H205 316 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 ARNT2Q9HBZ2 717 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 ASCL3Q9NQ33 180 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 ZNHIT2Q9UHR6 403 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 FEZ2Q9UHY8 353 aaPredicted RBP7.44□□□□□ -1.22
LINC00640-201ENST00000554409 TMPRSS11EQ9UL52 423 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 SATB2Q9UPW6 733 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 PKP3Q9Y446 797 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 PLEKHM1Q9Y4G2 1056 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 PCDHGA8Q9Y5G5 932 aa7.44□□□□□ -1.22
LINC00640-201ENST00000554409 ASPMQ8IZT6 3477 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 GLYATL1P3A0A0U1RQE8 302 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 TCRBV7S2A1N4TA0A589 114 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 OR5K4A6NMS3 321 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 RHPN2P1A8MT19 583 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 CDRT15L2A8MXV6 281 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 KMOO15229 486 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 PPM1DO15297 605 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 B4GAT1O43505 415 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 CPNE6O95741 557 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 AGTP01019 485 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 MPOP05164 745 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 PTMAP06454 111 aaKnown RBP7.43□□□□□ -1.22
LINC00640-201ENST00000554409 ACP5P13686 325 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 F3P13726 295 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 LPOP22079 712 aaPredicted RBP7.43□□□□□ -1.22
LINC00640-201ENST00000554409 STIP1P31948 543 aaKnown RBP7.43□□□□□ -1.22
LINC00640-201ENST00000554409 EIF2S3P41091 472 aaKnown RBP7.43□□□□□ -1.22
LINC00640-201ENST00000554409 INHBCP55103 352 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 GDF10P55107 478 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 PCBP4P57723 403 aaKnown RBP7.43□□□□□ -1.22
LINC00640-201ENST00000554409 PDE1BQ01064 536 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 ZFP36L1Q07352 338 aaKnown RBP7.43□□□□□ -1.22
LINC00640-201ENST00000554409 ITGA9Q13797 1035 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 PARP6Q2NL67 630 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 P3H1Q32P28 736 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 ATP13A5Q4VNC0 1218 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 C3orf38Q5JPI3 329 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.43□□□□□ -1.22
LINC00640-201ENST00000554409 KCTD11Q693B1 232 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 DENND5AQ6IQ26 1287 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 IYDQ6PHW0 289 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 ARHGEF18Q6ZSZ5 1173 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 B3GNT8Q7Z7M8 397 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 CLEC14AQ86T13 490 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 LRRTM4Q86VH4 590 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 SLITRK4Q8IW52 837 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 Q8N9G6 341 aaPredicted RBP7.43□□□□□ -1.22
LINC00640-201ENST00000554409 FAM71DQ8N9W8 422 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 AVL9Q8NBF6 648 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 DDHD1Q8NEL9 900 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 CCDC110Q8TBZ0 833 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 BRSK1Q8TDC3 778 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 SLC37A2Q8TED4 501 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 PATE1Q8WXA2 126 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 FGF11Q92914 225 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 TMEM159Q96B96 161 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 LRRC45Q96CN5 670 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 SLC46A1Q96NT5 459 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 ALS2CR12Q96Q35 445 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 TBL1YQ9BQ87 522 aa7.43□□□□□ -1.22
LINC00640-201ENST00000554409 TIMM29Q9BSF4 260 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms