RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 GLYATL1Q969I3 302 aa18.53■□□□□ 0.56
CPSF2-203ENST00000554290 RNF25Q96BH1 459 aaPredicted RBP18.53■□□□□ 0.56
CPSF2-203ENST00000554290 CHP1Q99653 195 aa18.53■□□□□ 0.56
CPSF2-203ENST00000554290 ZPBPQ9BS86 351 aa18.53■□□□□ 0.56
CPSF2-203ENST00000554290 SLC12A9Q9BXP2 914 aa18.53■□□□□ 0.56
CPSF2-203ENST00000554290 OSGEPL1Q9H4B0 414 aa18.53■□□□□ 0.56
CPSF2-203ENST00000554290 NHEJ1Q9H9Q4 299 aaPredicted RBP18.53■□□□□ 0.56
CPSF2-203ENST00000554290 ARFGAP3Q9NP61 516 aa18.53■□□□□ 0.56
CPSF2-203ENST00000554290 PRDM8Q9NQV8 689 aa18.53■□□□□ 0.56
CPSF2-203ENST00000554290 FBXO8Q9NRD0 319 aa18.53■□□□□ 0.56
CPSF2-203ENST00000554290 KLC4Q9NSK0 619 aa18.53■□□□□ 0.56
CPSF2-203ENST00000554290 STARD5Q9NSY2 213 aa18.53■□□□□ 0.56
CPSF2-203ENST00000554290 SPTLC3Q9NUV7 552 aa18.53■□□□□ 0.56
CPSF2-203ENST00000554290 NFKBIL1Q9UBC1 381 aaPredicted RBP18.53■□□□□ 0.56
CPSF2-203ENST00000554290 ZNF711Q9Y462 761 aa18.53■□□□□ 0.56
CPSF2-203ENST00000554290 LILRA5A6NI73 299 aa18.52■□□□□ 0.56
CPSF2-203ENST00000554290 KMOO15229 486 aa18.52■□□□□ 0.56
CPSF2-203ENST00000554290 CAPN5O15484 640 aaPredicted RBP18.52■□□□□ 0.56
CPSF2-203ENST00000554290 RAD1O60671 282 aa18.52■□□□□ 0.56
CPSF2-203ENST00000554290 SLC4A1P02730 911 aa18.52■□□□□ 0.56
CPSF2-203ENST00000554290 NR2C2P49116 596 aa18.52■□□□□ 0.56
CPSF2-203ENST00000554290 DYNLT1P63172 113 aa18.52■□□□□ 0.56
CPSF2-203ENST00000554290 TEX44Q53QW1 395 aa18.52■□□□□ 0.56
CPSF2-203ENST00000554290 ADGRG6Q86SQ4 1221 aa18.52■□□□□ 0.56
CPSF2-203ENST00000554290 PLXDC1Q8IUK5 500 aa18.52■□□□□ 0.56
CPSF2-203ENST00000554290 HTR3CQ8WXA8 447 aa18.52■□□□□ 0.56
CPSF2-203ENST00000554290 KIAA1143Q96AT1 154 aaPredicted RBP18.52■□□□□ 0.56
CPSF2-203ENST00000554290 TADA1Q96BN2 335 aa18.52■□□□□ 0.56
CPSF2-203ENST00000554290 GLOD4Q9HC38 313 aa18.52■□□□□ 0.56
CPSF2-203ENST00000554290 ADGRG1Q9Y653 693 aa18.52■□□□□ 0.56
CPSF2-203ENST00000554290 A0A0A6YYK5 440 aaPredicted RBP18.51■□□□□ 0.55
CPSF2-203ENST00000554290 CHUKO15111 745 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 VEGFDO43915 354 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 NDST3O95803 873 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 TNNT1P13805 278 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 LIFP15018 202 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 XRCC1P18887 633 aaPredicted RBP18.51■□□□□ 0.55
CPSF2-203ENST00000554290 MAP4P27816 1152 aaKnown RBP18.51■□□□□ 0.55
CPSF2-203ENST00000554290 NOP2P46087 812 aaKnown RBP18.51■□□□□ 0.55
CPSF2-203ENST00000554290 TFDP2Q14188 446 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 INSCQ1MX18 579 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 SKOR2Q2VWA4 1001 aaPredicted RBP18.51■□□□□ 0.55
CPSF2-203ENST00000554290 ZNF648Q5T619 568 aaPredicted RBP18.51■□□□□ 0.55
CPSF2-203ENST00000554290 LRRTM4Q86VH4 590 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 VSTM4Q8IW00 320 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 TRIM48Q8IWZ4 208 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 NLGN4XQ8N0W4 816 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 NLGN4YQ8NFZ3 816 aaPredicted RBP18.51■□□□□ 0.55
CPSF2-203ENST00000554290 SPATA22Q8NHS9 363 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 RTP4Q96DX8 246 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 PLEKHG4BQ96PX9 1271 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 TBC1D10AQ9BXI6 508 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 UCK1Q9HA47 277 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 KLHL3Q9UH77 587 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 PILRAQ9UKJ1 303 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 INTUQ9ULD6 942 aa18.51■□□□□ 0.55
CPSF2-203ENST00000554290 TENM4Q6N022 2769 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 ZNF891A8MT65 544 aaPredicted RBP18.5■□□□□ 0.55
CPSF2-203ENST00000554290 SPOPO43791 374 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 MFAP3LO75121 409 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 PPFIA2O75334 1257 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 PMPCBO75439 489 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 CDK14O94921 469 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 MT-CYBP00156 380 aaPredicted RBP18.5■□□□□ 0.55
CPSF2-203ENST00000554290 VIPP01282 170 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 ZNF7P17097 686 aaPredicted RBP18.5■□□□□ 0.55
CPSF2-203ENST00000554290 BPIP17213 487 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 ITGB6P18564 788 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 TNNT3P45378 269 aaPredicted RBP18.5■□□□□ 0.55
CPSF2-203ENST00000554290 KCNC4Q03721 635 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 BORAQ6PGQ7 559 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 CRTC3Q6UUV7 619 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 MFSD7Q6UXD7 560 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 TEKT5Q96M29 485 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 CTRCQ99895 268 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 TIMM29Q9BSF4 260 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 EFHD1Q9BUP0 239 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 TRIT1Q9H3H1 467 aaKnown RBP18.5■□□□□ 0.55
CPSF2-203ENST00000554290 CLMPQ9H6B4 373 aa18.5■□□□□ 0.55
CPSF2-203ENST00000554290 GEMIN8Q9NWZ8 242 aaKnown RBP18.5■□□□□ 0.55
CPSF2-203ENST00000554290 PDZK1P1A8MUH7 402 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 POLR1CO15160 346 aaPredicted RBP18.49■□□□□ 0.55
CPSF2-203ENST00000554290 MTSS1O43312 755 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 COMTP21964 271 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 PTPN3P26045 913 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 UBE2IP63279 158 aaKnown RBP18.49■□□□□ 0.55
CPSF2-203ENST00000554290 TCEAL1Q15170 157 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 PLA2G4EQ3MJ16 856 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 FAM182AQ5T1J6 154 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 ATG14Q6ZNE5 492 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 TMEM26Q6ZUK4 368 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 B4GALNT4Q76KP1 1039 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 CNGA4Q8IV77 575 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 TFB1MQ8WVM0 346 aaKnown RBP18.49■□□□□ 0.55
CPSF2-203ENST00000554290 CATSPER2Q96P56 530 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 VPS35Q96QK1 796 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 SPRY4Q9C004 299 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 ADNPQ9H2P0 1102 aa18.49■□□□□ 0.55
CPSF2-203ENST00000554290 GPN2Q9H9Y4 310 aaPredicted RBP18.49■□□□□ 0.55
CPSF2-203ENST00000554290 UBP1Q9NZI7 540 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms