RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 FBXO6Q9NRD1 293 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-210ENST00000553950 HS3ST3A1Q9Y663 406 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 FANCMQ8IYD8 2048 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 TLDC2A0PJX2 215 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 METTL12A8MUP2 240 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 SLC31A1O15431 190 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 MAGEC1O60732 1142 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 S1PR4O95977 384 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 SOD1P00441 154 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 FTH1P02794 183 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 OR56A5P0C7T3 313 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 KRT15P19012 456 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 CD27P26842 260 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 AVPR2P30518 371 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 TRIM23P36406 574 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 RABIFP47224 123 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 FNTBP49356 437 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 POU4F1Q01851 419 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 OVGP1Q12889 678 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 FGL2Q14314 439 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 SEMA3AQ14563 771 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 KCNJ9Q92806 393 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 BIRC7Q96CA5 298 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 COX14Q96I36 57 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 CABS1Q96KC9 395 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 KLF6Q99612 283 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-210ENST00000553950 DUSP15Q9H1R2 295 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-210ENST00000553950 EPHX3Q9H6B9 360 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 RMI1Q9H9A7 625 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 POPDC3Q9HBV1 291 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 MED4Q9NPJ6 270 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 ZNF446Q9NWS9 450 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 PSAT1Q9Y617 370 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 TRIOO75962 3097 aa14.36□□□□□ -0.11
SHMT2-210ENST00000553950 LRP4O75096 1905 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 FAM95CA0A1B0GW59 222 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 E5RI56 91 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 KPNA5O15131 536 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 UGT1A9O60656 530 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 VPS26AO75436 327 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 AHSGP02765 367 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 ATP1B2P14415 290 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-210ENST00000553950 PKMP14618 531 aaKnown RBP14.35□□□□□ -0.11
SHMT2-210ENST00000553950 UGT1A6P19224 532 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 CD9P21926 228 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 UGT1A1P22309 533 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 UGT1A4P22310 534 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 UGT1A3P35503 534 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 UGT1A5P35504 534 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 SLCO1A2P46721 670 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 PTK2BQ14289 1009 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 INPP5AQ14642 412 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 TAF1BQ53T94 588 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-210ENST00000553950 TMEM31Q5JXX7 168 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 PTRHD1Q6GMV3 140 aaKnown RBP14.35□□□□□ -0.11
SHMT2-210ENST00000553950 MACC1Q6ZN28 852 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 IQCHQ86VS3 1027 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 DCP2Q8IU60 420 aaKnown RBP14.35□□□□□ -0.11
SHMT2-210ENST00000553950 GPATCH11Q8N954 259 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 TMEM145Q8NBT3 493 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 ACMSDQ8TDX5 336 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 KLK6Q92876 244 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 SKA1Q96BD8 255 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 MRRFQ96E11 262 aaKnown RBP14.35□□□□□ -0.11
SHMT2-210ENST00000553950 SERAC1Q96JX3 654 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 HSPA12BQ96MM6 686 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 MCMBPQ9BTE3 642 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 AARSD1Q9BTE6 412 aaKnown RBP14.35□□□□□ -0.11
SHMT2-210ENST00000553950 C1QTNF1Q9BXJ1 281 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 FAM96AQ9H5X1 160 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 UGT1A7Q9HAW7 530 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 UGT1A10Q9HAW8 530 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 UGT1A8Q9HAW9 530 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 TRIM39Q9HCM9 518 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 ZSCAN32Q9NX65 697 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 EURLQ9NYK6 297 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 TAS2R13Q9NYV9 303 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 SLC17A6Q9P2U8 582 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 PCDHGA2Q9Y5H1 932 aa14.35□□□□□ -0.11
SHMT2-210ENST00000553950 INPP4BO15327 924 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 GPR39O43194 453 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 GPR37L1O60883 481 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 RHOBTB1O94844 696 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 STMN1P16949 149 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 GCAP28676 217 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 THOP1P52888 689 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 NFATC4Q14934 902 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 TTLL9Q3SXZ7 439 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 BCL7AQ4VC05 210 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 AGBL2Q5U5Z8 902 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 LRRC8EQ6NSJ5 796 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 ZC3H14Q6PJT7 736 aaKnown RBP14.34□□□□□ -0.11
SHMT2-210ENST00000553950 TSSK4Q6SA08 328 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 RABEPKQ7Z6M1 372 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 ABI3BPQ7Z7G0 1075 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 LDB1Q86U70 411 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-210ENST00000553950 LCA5Q86VQ0 697 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 FAM160A2Q8N612 972 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-210ENST00000553950 NELL1Q92832 810 aa14.34□□□□□ -0.11
SHMT2-210ENST00000553950 ISL2Q96A47 359 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms